grenedalf v0.6.0

This release adds some features related to position masking. Furthermore, it renames a few options for consistency: Options that ended in -file are now more concisely named.

Notable Changes

• Add window averaging with a provided mask #24
• Add per-sample mask options #25
• Add --make-gapless option #26
• Add bed mask invert option
• Add option to set missing value for frequency table
• Rename -file option names for clarity
• Use a faster thread pool for speed gains with few samples

Bug Fixes

• Fix missing data treatment in window average available loci setting #26
• Fix ref base lower case comparison issue