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Improve sensitivity of low purity amplification calling pipeline #239

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2 tasks

lima1 opened this issue May 29, 2022 · 0 comments

Open

2 tasks

Improve sensitivity of low purity amplification calling pipeline #239

lima1 opened this issue May 29, 2022 · 0 comments

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lima1 commented May 29, 2022

gene-level summary not necessarily best way of doing it. check if we can safely extend to neighboring baits. maybe start 500kb left and right, iteratively shorten to gene-level
include allelic imbalance if SNPs with high confidence beta-bin fit are

lima1 added the enhancement label

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