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Issues list

Replace zodios
#3305 opened Nov 27, 2024 by fhennig
1
Surface more info on preprocessing tools discussion Open questions preprocessing Issues related to the preprocessing component
#3301 opened Nov 26, 2024 by emmahodcroft
Support submissions with date ranges discussion Open questions feature Feature proposal ingest Ingest pipeline preprocessing Issues related to the preprocessing component
#3300 opened Nov 26, 2024 by emmahodcroft
Consider recording 'mid-submission' edits that are not done by the submitter discussion Open questions
#3298 opened Nov 26, 2024 by emmahodcroft
Zodios maintenance status: last commit 14 months ago, pinning us to tanstack react query v4 dependencies Pull requests that update a dependency file website Tasks related to the web application
#3295 opened Nov 25, 2024 by corneliusroemer
Implement date search that works intuitively with new date range fields feature Feature proposal website Tasks related to the web application
#3285 opened Nov 25, 2024 by corneliusroemer Priority 1 (highest)
12
keycloakify: Don't hardcode termsAcceptanceRequired=true; use realm config instead keycloak Related to keycloak and keycloakify
#3284 opened Nov 25, 2024 by fhennig
9
Add documentation about date range search documentation Improvements or additions to documentation
#3282 opened Nov 25, 2024 by chaoran-chen
Is getSequences endpoint really used in full by anything? It seems no longer fit for purpose: should it be replaced? backend related to the loculus backend component discussion Open questions refactoring Code requires refactoring website Tasks related to the web application
#3280 opened Nov 23, 2024 by corneliusroemer
2
Edit account information button seems to use wrong target URL in local dev: https instead of http bug Something isn't working website Tasks related to the web application
#3273 opened Nov 22, 2024 by corneliusroemer
Submission portal takes multiple seconds to load if there are 10k sequences to review bug Something isn't working performance website Tasks related to the web application
#3269 opened Nov 21, 2024 by corneliusroemer
1
3
We need to reduce the frequency at which we poll Github for curated data updates bug Something isn't working
#3268 opened Nov 21, 2024 by corneliusroemer
Backend log message is wrong, it doesn't mention all the extra filters that have been added to endpoint backend related to the loculus backend component codesmell For warnings/lints without immediate harm but to be fixed eventually
#3267 opened Nov 21, 2024 by corneliusroemer
Create new field: original_input_data that doesn't need to conform to a consistent schema (because the input schema can change)
#3262 opened Nov 20, 2024 by theosanderson
4
Configure favicon of website feature Feature proposal website Tasks related to the web application
#3261 opened Nov 20, 2024 by fengelniederhammer
5
Decide what to do with openid-client v6: it's a total rewrite, expensive migration, wait and see? dependencies Pull requests that update a dependency file discussion Open questions refactoring Code requires refactoring
#3260 opened Nov 20, 2024 by corneliusroemer
6
More useful log message when "Checking for newer processing pipeline versions" backend related to the loculus backend component feature Feature proposal
#3249 opened Nov 19, 2024 by corneliusroemer
backend config: consolidate external metadata into metadata backend related to the loculus backend component config Configuration related issues, i.e. helm processing refactoring Code requires refactoring
#3245 opened Nov 19, 2024 by corneliusroemer
Grammar error in error message: "Failed to revoke sequence entry: Accession versions are in not in one of the states" bug Something isn't working website Tasks related to the web application
#3243 opened Nov 19, 2024 by corneliusroemer
Delete processed data of no-longer-current pipeline versions after upgrade to save on storage backend related to the loculus backend component feature Feature proposal performance
#3240 opened Nov 19, 2024 by corneliusroemer
1
Occasionally failing E2E test: [webkit] › pages/search/index.spec.ts:45:5 › The search page › should search a few sequence entries by accession codesmell For warnings/lints without immediate harm but to be fixed eventually e2e E2E test related
#3239 opened Nov 19, 2024 by corneliusroemer
Add "E2E" test that revises a sequence e2e E2E test related feature Feature proposal tests Test related issues
#3238 opened Nov 19, 2024 by corneliusroemer
1
Rename GetDataToEdit endpoint to reflect that it now gets data for revision form too
#3228 opened Nov 18, 2024 by theosanderson
Submit individual sequences via a form
#3226 opened Nov 18, 2024 by theosanderson
Dropdown menus on edit page website Tasks related to the web application
#3225 opened Nov 18, 2024 by theosanderson
1
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