Skip to content

lvmt/snakemake_learn

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

24 Commits
 
 
 
 
 
 
 
 

Repository files navigation

snakemake_learn

use snakemake to make a pipeline

record my learn

modify

snakemake书写中的坑

1)找不到wildcards##

snakemake根据output中的通配符,获取整个rule的通配符;

如果某个通配符不在output中,但是在其他子命令中,表明该程序的设计存在问题。

2)提示输出的文件在不同的shell中是一样

此次需要重新设计,尽量在输出文件的前面加上通配符。

About

use snakemake to make a pipeline

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published