Various fixes #18

maehr · 2024-05-06T07:20:12Z

Pull request

Proposed changes

Types of changes

New feature (non-breaking change which adds functionality).
Enhancement (non-breaking change which enhances functionality)
Bug Fix (non-breaking change which fixes an issue).
Breaking change (fix or feature that would cause existing functionality to change).

Checklist

I have read the README document.
My change requires a change to the documentation.
I have updated the documentation accordingly.

coderabbitai · 2024-05-06T07:20:20Z

Walkthrough

The recent updates revolve around enhancing license management and presentation for a GitHub repository dedicated to open research data. Changes include configuring website settings in Quarto, updating license files and badges, and adding a new step in the GitHub workflow for proper setup before publishing.

Changes

File Path	Change Summary
`.github/_quarto.yml`	Introduced configurations for the open research data website.
`.github/labeler.yml`, `README.template.md`	Updated license files to `LICENSE-AGPL.md` and `LICENSE-CCBY.md`, removing `LICENSE.md`. Updated license badges and URLs.
`.github/workflows/quarto-publish.yml`	Added a step to overwrite `_quarto.yml` before Quarto setup.
`README.md`	Updated license badges and URLs to point to new license files and added a DOI badge.

Poem

🌟🐰✨
In the realm of code and data,
Where bytes and bits do play,
A rabbit brings changes, fresh and true,
Badges gleam, licenses renew.
Hop, hop, hurray! Let's celebrate fate,
For open data, we elevate!
📜🎉🐇

` → `[![DOI](https://zenodo.org/badge/ZENODO_RECORD.svg)](https://zenodo.org/badge/latestdoi/ZENODO_RECORD)`

README.template.md: ## Short Summary
The change in functionality involves updating the license information in the README file of the repository. The URLs for the license badges have been modified to point to different license files, specifically LICENSE-AGPL.md for the code license and LICENSE-CCBY.md for the data license.

Alterations to the declarations of exported or public entities

[![GitHub license](https://img.shields.io/github/license/USERNAME/REPO_NAME.svg)](https://github.com/USERNAME/REPO_NAME/blob/main/LICENSE.md)
→ [![Code license](https://img.shields.io/github/license/USERNAME/REPO_NAME.svg)](https://github.com/USERNAME/REPO_NAME/blob/main/LICENSE-AGPL.md) in README.template.md
[![GitHub license](https://img.shields.io/github/license/USERNAME/REPO_NAME.svg)](https://github.com/USERNAME/REPO_NAME/blob/main/LICENSE.md)
→ [![Data license](https://img.shields.io/github/license/USERNAME/REPO_NAME.svg)](https://github.com/USERNAME/REPO_NAME/blob/main/LICENSE-CCBY.md) in README.template.md


-->
<!-- end of auto-generated comment: raw summary by coderabbit.ai --><!-- This is an auto-generated comment: short summary by coderabbit.ai -->
<!--


### PR Objectives (User Provided Facts)

The pull request titled "Various fixes" (PR #18) aims to introduce enhancements and bug fixes to the project. The changes proposed do not introduce any new features or breaking changes but focus on improving existing functionalities and resolving issues. The PR checklist confirms adherence to the project's documentation standards and includes updates to the documentation as required by the changes.

### AI-Generated Summary of Generated Summaries

This pull request encompasses a series of updates across multiple configuration and documentation files within the project's GitHub repository. Here's a detailed breakdown:

1. **Quarto Configuration Updates**:
   - The `.github/_quarto.yml` file has been configured to set up a website related to open research data. This includes settings for the website's title, URLs, navigation elements, sidebar contents, formatting options, and the choice of editor.

2. **License File Adjustments**:
   - The project's licensing documentation has undergone significant changes. The original `LICENSE.md` has been replaced with two new files: `LICENSE-AGPL.md` and `LICENSE-CCBY.md`. These changes are reflected in the `.github/labeler.yml` file, which now points to these new license files instead of the old one.

3. **GitHub Workflow Enhancements**:
   - A new step has been added to the `.github/workflows/quarto-publish.yml` workflow. This step involves overwriting the `_quarto.yml` file before setting up Quarto, ensuring that the latest configurations are used during the publishing process.

4. **README Updates**:
   - The `README.md` and `README.template.md` files have been updated to reflect the new licensing structure. The license badges and URLs have been updated to point to the new `LICENSE-AGPL.md` and `LICENSE-CCBY.md` files. Additionally, a DOI badge from Zenodo has been added to `README.md`, enhancing the repository's credibility and traceability.

These updates collectively enhance the project's documentation clarity, licensing transparency, and configuration management, ensuring that the project adheres to best practices in open research and data management.

### Alterations to the Declarations of Exported or Public Entities

- **.github/_quarto.yml**:
  - No alterations to the declarations of exported or public entities were made in this file.

- **.github/labeler.yml**:
  - Removed: `LICENSE.md`
  - Added: `LICENSE-AGPL.md`, `LICENSE-CCBY.md`

- **.github/workflows/quarto-publish.yml**:
  - No alterations to the declarations of exported or public entities were made in this file.

- **README.md**:
  - Changed:
    - From: `[![GitHub license](https://img.shields.io/github/license/maehr/open-research-data-template.svg)](https://github.com/maehr/open-research-data-template/blob/main/LICENSE.md)`
    - To: `[![Code license](https://img.shields.io/github/license/USERNAME/REPO_NAME.svg)](https://github.com/USERNAME/REPO_NAME/blob/main/LICENSE-AGPL.md)`
    - To: `[![Data license](https://img.shields.io/github/license/USERNAME/REPO_NAME.svg)](https://github.com/USERNAME/REPO_NAME/blob/main/LICENSE-CCBY.md)`
    - Added: `[![DOI](https://zenodo.org/badge/ZENODO_RECORD.svg)](https://zenodo.org/badge/latestdoi/ZENODO_RECORD)`

- **README.template.md**:
  - Changed:
    - From: `[![GitHub license](https://img.shields.io/github/license/USERNAME/REPO_NAME.svg)](https://github.com/USERNAME/REPO_NAME/blob/main/LICENSE.md)`
    - To: `[![Code license](https://img.shields.io/github/license/USERNAME/REPO_NAME.svg)](https://github.com/USERNAME/REPO_NAME/blob/main/LICENSE-AGPL.md)`
    - To: `[![Data license](https://img.shields.io/github/license/USERNAME/REPO_NAME.svg)](https://github.com/USERNAME/REPO_NAME/blob/main/LICENSE-CCBY.md)`

-->
<!-- end of auto-generated comment: short summary by coderabbit.ai --><!-- commit_ids_reviewed_start -->

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package.json is excluded by !**/*.json
pnpm-lock.yaml is excluded by !pnpm-lock.yaml, !**/*.yaml

Files selected for processing (5)

.github/_quarto.yml (1 hunks)
.github/labeler.yml (1 hunks)
.github/workflows/quarto-publish.yml (1 hunks)
README.md (2 hunks)
README.template.md (1 hunks)

Files skipped from review due to trivial changes (3)

.github/_quarto.yml
.github/labeler.yml
.github/workflows/quarto-publish.yml

Additional Context Used

LanguageTool (35)

README.md (30)

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Context: ...rity - SECURITY.md per GitHub - [GitHub Security Alerts](https://github.blog/20...

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README.template.md

README.md

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Files selected for processing (2)

.github/workflows/quarto-publish.yml (1 hunks)
README.md (3 hunks)

Files skipped from review as they are similar to previous changes (1)

.github/workflows/quarto-publish.yml

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LanguageTool (29)

README.md (29)

Near line 18: Unpaired symbol: ‘]’ seems to be missing
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Near line 43: Unpaired symbol: ‘]’ seems to be missing
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Context: ...rotection-rule) - Consistent issues via [issue templates](https://docs.github.com...

Near line 49: Unpaired symbol: ‘]’ seems to be missing
Context: ...urity - SECURITY.md per [GitHub](https://docs.github.com/en/code-...

Near line 49: Possible typo: you repeated a word
Context: ...rity - SECURITY.md per GitHub - [GitHub Security Alerts](https://github.blog/20...

Near line 55: Unpaired symbol: ‘]’ seems to be missing
Context: ...CONDUCT.md](CODE_OF_CONDUCT.md) per the [Contributor Covenant](https://www.contri...

Near line 56: Unpaired symbol: ‘]’ seems to be missing
Context: ...g/) - Friendly initial interactions via [Greetings](https://github.com/actions/st...

Near line 71: Unpaired symbol: ‘]’ seems to be missing
Context: ...emplate for your project: - [ ] enable [GitHub security alerts](https://github.b...

Near line 73: Unpaired symbol: ‘]’ seems to be missing
Context: ...EADME.template.md](README.template.md), SECURITY.md - [ ] setup th...

Near line 74: Unpaired symbol: ‘]’ seems to be missing
Context: ...CURITY.md](SECURITY.md) - [ ] setup the [Zenodo integration](https://docs.github....

Near line 75: Unpaired symbol: ‘]’ seems to be missing
Context: ...g-content) - [ ] add ZENODO_RECORD to README.md - [ ] add favicons...

Near line 76: Unpaired symbol: ‘]’ seems to be missing
Context: ...d) - [ ] add favicons to ./, e.g. via favicon.io - [ ] s...

Near line 78: Unpaired symbol: ‘]’ seems to be missing
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Context: ...DME.template.md](README.template.md) to README.md - [ ] run `npm run...

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Additional comments not posted (2)

README.md (2)

8-9: The updates to the license badges are aligned with the new licensing structure. Ensure that the placeholders USERNAME and REPO_NAME are replaced with actual values.

11-11: Ensure the placeholder ZENODO_RECORD in the DOI badge is replaced with an actual DOI record.

maehr added 4 commits May 6, 2024 09:17

ci: fixed quarto pipeline

a6c0761

fix: readme and licenses fixed

a4b0c48

chore: dependencies updated to latest

9970fdd

chore: husky config updated

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maehr added 5 commits May 6, 2024 09:28

fix: wrong uri fix

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ci: labeler conf migrated to v5

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ci: labeler conf migrated to v5

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maehr requested review from koilebeit and mtwente May 6, 2024 08:45

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maehr added 2 commits May 6, 2024 23:40

ci: sveltekitci quickfix

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maehr requested a review from mtwente May 6, 2024 21:42

mtwente approved these changes May 6, 2024

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maehr requested a review from mtwente May 6, 2024 21:51

maehr merged commit 1229e3c into main May 6, 2024
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maehr deleted the various_fixes branch May 6, 2024 21:56

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Various fixes #18

Various fixes #18

maehr commented May 6, 2024

coderabbitai bot commented May 6, 2024 •

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Various fixes #18

Various fixes #18

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maehr commented May 6, 2024

Pull request

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Types of changes

Checklist

coderabbitai bot commented May 6, 2024 • edited Loading

Walkthrough

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Poem

Alterations to the declarations of exported or public entities

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coderabbitai bot commented May 6, 2024 •

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