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FIX: Connectivity saved to .nc and other fixes #211

FIX: Connectivity saved to .nc and other fixes

FIX: Connectivity saved to .nc and other fixes #211

Workflow file for this run

name: CIs
on:
pull_request:
push:
branches:
- main
jobs:
pytest:
strategy:
fail-fast: false
matrix:
os: [ ubuntu, windows, macos ]
python: [ '3.11' ]
# Test PyQt5 for backwards compatibility, PySide2 is left out to save runners
qt : [ 'PySide6' , 'PyQt6', 'PyQt5']
include:
- os: ubuntu
python: '3.9'
qt : 'PySide6'
- os: ubuntu
python: '3.10'
qt : 'PySide6'
name: Run tests on ${{ matrix.os }} - ${{matrix.python}} - ${{ matrix.qt }}
runs-on: ${{ matrix.os }}-latest
defaults:
run:
shell: bash
steps:
- uses: actions/checkout@v4
# Set up headless display for windows and linux
- name: Setup headless display
uses: pyvista/setup-headless-display-action@main
with:
qt: true
pyvista: false
- name: Set up Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python }}
- name: Installation with dependencies
run: |
python -m pip install --upgrade pip
python -m pip install ${{ matrix.qt }}
python -m pip install -ve ".[tests]"
- name: Get testing version
run: |
mkdir -p mne/datasets
curl --output-dir mne/datasets/ --remote-name https://raw.githubusercontent.com/mne-tools/mne-python/main/mne/datasets/config.py
curl --remote-name https://raw.githubusercontent.com/mne-tools/mne-python/main/tools/get_testing_version.sh
bash ./get_testing_version.sh
- uses: actions/cache@v3
with:
key: ${{ env.TESTING_VERSION }}
path: ~/mne_data
name: 'Cache testing data'
- name: 'Download testing, sample and fsaverage data'
run: |
python -c 'import mne; mne.datasets.testing.data_path(); mne.datasets.sample.data_path(); mne.datasets.fetch_fsaverage()'
- name: Show system information
run: mne sys_info
- run: pytest
name: Run Tests