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1. dsNickFury3PlusOrchid dsNickFury3PlusOrchid Public

   dsNickFury is for comparing a CRISPR target site against all other potential sites in a genome. Orchid is a package I'm developing to go with it for iterative CRISPR analysis over an exome.

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3. w32-rps-Spring2024 w32-rps-Spring2024 Public

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5. autoIGV autoIGV Public

   This program can take a tab-delimited text file containing bam file paths and loci and create a subdirectory of image captures for you.

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6. dsNickFury dsNickFury Public

   This program is designed to look for potential off-target hits by any Cas9-Crispr type of system, including ones from alternate species with different PAM sites. This program requires python3 and a…

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