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update workflow_process_factory
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mbthornton-lbl committed Nov 20, 2024
1 parent f6a52f0 commit 0e81082
Showing 1 changed file with 15 additions and 3 deletions.
18 changes: 15 additions & 3 deletions nmdc_automation/models/nmdc.py
Original file line number Diff line number Diff line change
Expand Up @@ -9,9 +9,20 @@
import yaml


from nmdc_schema.nmdc import DataGeneration, FileTypeEnum, MagsAnalysis, MetagenomeAnnotation, MetagenomeAssembly, \
MetatranscriptomeAnnotation, MetatranscriptomeAssembly, MetatranscriptomeExpressionAnalysis, NucleotideSequencing, \
ReadBasedTaxonomyAnalysis, ReadQcAnalysis, WorkflowExecution
from nmdc_schema.nmdc import (
DataGeneration,
MagsAnalysis,
MetagenomeAnnotation,
MetagenomeAssembly,
MetagenomeSequencing,
MetatranscriptomeAnnotation,
MetatranscriptomeAssembly,
MetatranscriptomeExpressionAnalysis,
NucleotideSequencing,
ReadBasedTaxonomyAnalysis,
ReadQcAnalysis,
WorkflowExecution
)
import nmdc_schema.nmdc as nmdc


Expand All @@ -32,6 +43,7 @@ def workflow_process_factory(record: Dict[str, Any], validate: bool = False) ->
"nmdc:MagsAnalysis": MagsAnalysis,
"nmdc:MetagenomeAnnotation": MetagenomeAnnotation,
"nmdc:MetagenomeAssembly": MetagenomeAssembly,
"nmdc:MetagenomeSequencing": MetagenomeSequencing,
"nmdc:MetatranscriptomeAnnotation": MetatranscriptomeAnnotation,
"nmdc:MetatranscriptomeAssembly": MetatranscriptomeAssembly,
"nmdc:MetatranscriptomeExpressionAnalysis": MetatranscriptomeExpressionAnalysis,
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