[docs] remove link to Roadmap (fixes #6556) #8784
Workflow file for this run
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name: R-package | |
on: | |
push: | |
branches: | |
- master | |
pull_request: | |
branches: | |
- master | |
# automatically cancel in-progress builds if another commit is pushed | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
env: | |
# https://github.com/actions/checkout/issues/1590#issuecomment-2207052044 | |
# | |
# this could be removed (hopefully) when R 3.6 support is removed | |
ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION: true | |
# in CMake-driven builds, parallelize compilation | |
CMAKE_BUILD_PARALLEL_LEVEL: 4 | |
# on Debian-based images, avoid interactive prompts | |
DEBIAN_FRONTEND: noninteractive | |
# parallelize compilation (extra important for Linux, where CRAN doesn't supply pre-compiled binaries) | |
MAKEFLAGS: "-j4" | |
# hack to get around this: | |
# https://stat.ethz.ch/pipermail/r-package-devel/2020q3/005930.html | |
_R_CHECK_SYSTEM_CLOCK_: 0 | |
# ignore R CMD CHECK NOTE checking how long it has | |
# been since the last submission | |
_R_CHECK_CRAN_INCOMING_REMOTE_: 0 | |
# CRAN ignores the "installed size is too large" NOTE, | |
# so our CI can too. Setting to a large value here just | |
# to catch extreme problems | |
_R_CHECK_PKG_SIZES_THRESHOLD_: 100 | |
jobs: | |
test: | |
name: ${{ matrix.task }} (${{ matrix.os }}, ${{ matrix.compiler }}, R ${{ matrix.r_version }}, ${{ matrix.build_type }}) | |
runs-on: ${{ matrix.os }} | |
container: ${{ matrix.container }} | |
timeout-minutes: 60 | |
strategy: | |
fail-fast: false | |
matrix: | |
include: | |
################ | |
# CMake builds # | |
################ | |
- os: ubuntu-latest | |
task: r-package | |
compiler: gcc | |
r_version: 3.6 | |
build_type: cmake | |
container: 'ubuntu:18.04' | |
- os: ubuntu-latest | |
task: r-package | |
compiler: gcc | |
r_version: 4.3 | |
build_type: cmake | |
container: 'ubuntu:22.04' | |
- os: ubuntu-latest | |
task: r-package | |
compiler: clang | |
r_version: 4.3 | |
build_type: cmake | |
container: 'ubuntu:22.04' | |
- os: macos-13 | |
task: r-package | |
compiler: gcc | |
r_version: 4.3 | |
build_type: cmake | |
container: null | |
- os: macos-13 | |
task: r-package | |
compiler: clang | |
r_version: 4.3 | |
build_type: cmake | |
container: null | |
- os: windows-latest | |
task: r-package | |
compiler: MINGW | |
toolchain: MINGW | |
r_version: 3.6 | |
build_type: cmake | |
container: null | |
- os: windows-latest | |
task: r-package | |
compiler: MINGW | |
toolchain: MSYS | |
r_version: 4.3 | |
build_type: cmake | |
container: null | |
# Visual Studio 2019 | |
- os: windows-2019 | |
task: r-package | |
compiler: MSVC | |
toolchain: MSVC | |
r_version: 3.6 | |
build_type: cmake | |
container: null | |
# Visual Studio 2022 | |
- os: windows-2022 | |
task: r-package | |
compiler: MSVC | |
toolchain: MSVC | |
r_version: 4.3 | |
build_type: cmake | |
container: null | |
############### | |
# CRAN builds # | |
############### | |
- os: windows-latest | |
task: r-package | |
compiler: MINGW | |
toolchain: MINGW | |
r_version: 3.6 | |
build_type: cran | |
container: null | |
- os: windows-latest | |
task: r-package | |
compiler: MINGW | |
toolchain: MSYS | |
r_version: 4.3 | |
build_type: cran | |
container: null | |
- os: ubuntu-latest | |
task: r-package | |
compiler: gcc | |
r_version: 4.3 | |
build_type: cran | |
container: 'ubuntu:22.04' | |
- os: macos-13 | |
task: r-package | |
compiler: clang | |
r_version: 4.3 | |
build_type: cran | |
container: null | |
# macos-14 = arm64 | |
- os: macos-14 | |
task: r-package | |
compiler: clang | |
r_version: 4.3 | |
build_type: cran | |
container: null | |
steps: | |
- name: Prevent conversion of line endings on Windows | |
if: startsWith(matrix.os, 'windows') | |
shell: pwsh | |
run: git config --global core.autocrlf false | |
- name: Install packages used by third-party actions | |
if: startsWith(matrix.os, 'ubuntu') | |
shell: bash | |
run: | | |
apt-get update -y | |
apt-get install --no-install-recommends -y \ | |
ca-certificates \ | |
dirmngr \ | |
gpg \ | |
gpg-agent \ | |
software-properties-common \ | |
sudo | |
# install newest version of git | |
# ref: | |
# - https://unix.stackexchange.com/a/170831/550004 | |
# - https://git-scm.com/download/linux | |
add-apt-repository ppa:git-core/ppa -y | |
apt-get update -y | |
apt-get install --no-install-recommends -y \ | |
git | |
- name: Trust git cloning LightGBM | |
if: startsWith(matrix.os, 'ubuntu') | |
run: | | |
git config --global --add safe.directory "${GITHUB_WORKSPACE}" | |
- name: Checkout repository | |
uses: actions/checkout@v3 | |
with: | |
fetch-depth: 5 | |
submodules: true | |
- name: Install pandoc | |
uses: r-lib/actions/setup-pandoc@v2 | |
if: matrix.container != 'ubuntu:18.04' | |
# R 3.6 binary isn't easily available on buntu 18.04, | |
# but setup-pandoc>=2.7.1 is uses a too-new glibc for it. | |
# ref: https://github.com/microsoft/LightGBM/issues/6298 | |
- name: Install pandoc | |
uses: r-lib/actions/[email protected] | |
if: matrix.container == 'ubuntu:18.04' | |
- name: install tinytex | |
if: startsWith(matrix.os, 'windows') | |
uses: r-lib/actions/setup-tinytex@v2 | |
env: | |
CTAN_MIRROR: https://ctan.math.illinois.edu/systems/win32/miktex | |
TINYTEX_INSTALLER: TinyTeX | |
- name: Setup and run tests on Linux and macOS | |
if: startsWith(matrix.os, 'macos') || startsWith(matrix.os, 'ubuntu') | |
shell: bash | |
run: | | |
export TASK="${{ matrix.task }}" | |
export COMPILER="${{ matrix.compiler }}" | |
if [[ "${{ matrix.os }}" =~ ^macos ]]; then | |
export OS_NAME="macos" | |
elif [[ "${{ matrix.os }}" == "ubuntu-latest" ]]; then | |
export OS_NAME="linux" | |
export IN_UBUNTU_BASE_CONTAINER="true" | |
# the default version of cmake provided on Ubuntu 18.04 (v3.10.2), is not supported by LightGBM | |
# see https://github.com/microsoft/LightGBM/issues/5642 | |
if [[ "${{ matrix.container }}" == "ubuntu:18.04" ]]; then | |
export INSTALL_CMAKE_FROM_RELEASES="true" | |
fi | |
fi | |
export BUILD_DIRECTORY="$GITHUB_WORKSPACE" | |
export R_VERSION="${{ matrix.r_version }}" | |
export R_BUILD_TYPE="${{ matrix.build_type }}" | |
$GITHUB_WORKSPACE/.ci/setup.sh | |
$GITHUB_WORKSPACE/.ci/test.sh | |
- name: Setup and run tests on Windows | |
if: startsWith(matrix.os, 'windows') | |
shell: pwsh -command ". {0}" | |
run: | | |
$env:BUILD_SOURCESDIRECTORY = $env:GITHUB_WORKSPACE | |
$env:LGB_VER = (Get-Content -TotalCount 1 $env:BUILD_SOURCESDIRECTORY\VERSION.txt).trim().replace('rc', '-') | |
$env:TOOLCHAIN = "${{ matrix.toolchain }}" | |
$env:R_VERSION = "${{ matrix.r_version }}" | |
$env:R_BUILD_TYPE = "${{ matrix.build_type }}" | |
$env:COMPILER = "${{ matrix.compiler }}" | |
$env:TASK = "${{ matrix.task }}" | |
& "$env:GITHUB_WORKSPACE/.ci/test_windows.ps1" | |
test-r-sanitizers: | |
name: r-sanitizers (ubuntu-latest, R-devel, ${{ matrix.compiler }} ASAN/UBSAN) | |
timeout-minutes: 60 | |
runs-on: ubuntu-latest | |
container: wch1/r-debug | |
strategy: | |
fail-fast: false | |
matrix: | |
include: | |
- r_customization: san | |
compiler: gcc | |
- r_customization: csan | |
compiler: clang | |
steps: | |
- name: Trust git cloning LightGBM | |
run: | | |
git config --global --add safe.directory "${GITHUB_WORKSPACE}" | |
- name: Checkout repository | |
uses: actions/checkout@v4 | |
with: | |
fetch-depth: 5 | |
submodules: true | |
- name: Install packages | |
shell: bash | |
run: | | |
RDscript${{ matrix.r_customization }} -e "install.packages(c('R6', 'data.table', 'jsonlite', 'knitr', 'markdown', 'Matrix', 'RhpcBLASctl', 'testthat'), repos = 'https://cran.rstudio.com', Ncpus = parallel::detectCores())" | |
sh build-cran-package.sh --r-executable=RD${{ matrix.r_customization }} | |
RD${{ matrix.r_customization }} CMD INSTALL lightgbm_*.tar.gz || exit 1 | |
- name: Run tests with sanitizers | |
shell: bash | |
run: | | |
cd R-package/tests | |
exit_code=0 | |
RDscript${{ matrix.r_customization }} testthat.R >> tests.log 2>&1 || exit_code=-1 | |
cat ./tests.log | |
exit ${exit_code} | |
test-r-extra-checks: | |
name: r-package (${{ matrix.image }}, R-devel) | |
timeout-minutes: 60 | |
strategy: | |
fail-fast: false | |
matrix: | |
# references: | |
# * CRAN "additional checks": https://cran.r-project.org/web/checks/check_issue_kinds.html | |
# * images: https://r-hub.github.io/containers/containers.html | |
image: | |
- clang16 | |
- clang17 | |
- clang18 | |
- clang19 | |
- gcc14 | |
- intel | |
runs-on: ubuntu-latest | |
container: ghcr.io/r-hub/containers/${{ matrix.image }}:latest | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v4 | |
with: | |
fetch-depth: 5 | |
submodules: true | |
- name: Install pandoc | |
uses: r-lib/actions/setup-pandoc@v2 | |
- name: Install LaTeX | |
shell: bash | |
run: | | |
if type -f apt 2>&1 > /dev/null; then | |
apt-get update | |
apt-get install --no-install-recommends -y \ | |
devscripts \ | |
texinfo \ | |
texlive-latex-extra \ | |
texlive-latex-recommended \ | |
texlive-fonts-recommended \ | |
texlive-fonts-extra \ | |
tidy \ | |
qpdf | |
else | |
yum update -y | |
yum install -y \ | |
devscripts \ | |
qpdf \ | |
texinfo \ | |
texinfo-tex \ | |
texlive-latex \ | |
tidy | |
fi | |
- name: Install packages and run tests | |
shell: bash | |
run: | | |
# patch around library-loading issues in clang18 image | |
# ref: https://github.com/microsoft/LightGBM/issues/6553 | |
if [[ "${{ matrix.image }}" == "clang18" ]]; then | |
export LD_LIBRARY_PATH="/usr/lib/llvm-18/lib:${LD_LIBRARY_PATH}" | |
fi | |
Rscript -e "install.packages(c('R6', 'data.table', 'jsonlite', 'knitr', 'markdown', 'Matrix', 'RhpcBLASctl', 'testthat'), repos = 'https://cran.rstudio.com', Ncpus = parallel::detectCores())" | |
sh build-cran-package.sh | |
if [[ "${{ matrix.image }}" =~ "clang" ]]; then | |
# allowing the following NOTEs (produced by default in the clang images): | |
# | |
# * checking compilation flags used ... NOTE | |
# Compilation used the following non-portable flag(s): | |
# ‘-Wp,-D_FORTIFY_SOURCE=3’ | |
# | |
# even though CRAN itself sets that: | |
# https://www.stats.ox.ac.uk/pub/bdr/Rconfig/r-devel-linux-x86_64-fedora-clang | |
# | |
declare -i allowed_notes=1 | |
else | |
declare -i allowed_notes=0 | |
fi | |
bash .ci/run-r-cmd-check.sh \ | |
"$(echo lightgbm_$(head -1 VERSION.txt).tar.gz)" \ | |
"${allowed_notes}" | |
all-r-package-jobs-successful: | |
if: always() | |
runs-on: ubuntu-latest | |
needs: [test, test-r-sanitizers, test-r-extra-checks] | |
steps: | |
- name: Note that all tests succeeded | |
uses: re-actors/[email protected] | |
with: | |
jobs: ${{ toJSON(needs) }} |