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A conda-smithy repository for nghttp2.
PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.
Library extending Jupyter notebooks to integrate with Apache TinkerPop, openCypher, and RDF SPARQL.
Nextflow pipeline to re-process all public single-cell RNA-seq data
Genome modeling and design across all domains of life
Arc Virtual Cell Atlas
Bencharking pipeline for evaluating Transcriptomic representations for perturbation tasks
A toolchain for web projects, aimed to provide functionalities to maintain them. Biome offers formatter and linter, usable via CLI and LSP.
TIFF decoding library from https://gitlab.com/libtiff/libtiff
DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images
This is the latest version of the internal repository from Pebble Technology providing the software to run on Pebble watches. Proprietary source code has been removed from this repository and it wi…
Notebook guide: https://github.com/chanzuckerberg/cellxgene-ontology-guide/blob/main/api/python/notebooks/Python%20API.ipynb
public production version of sequin to share with the public
Mixture of Gaussian Processes Model for Sparse Longitudinal Data
MorphoDiff is a diffusion based generative pipeline to predict high-resolution cell morphological responses under different conditions based on perturbation encoding.
Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks
quickly filter fastq files by matching sequences to a set of regex patterns
HEST: Bringing Spatial Transcriptomics and Histopathology together - NeurIPS 2024 (Spotlight)