Survival2 #274
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| on: | |
| pull_request: | |
| branches: | |
| - main | |
| name: build | |
| jobs: | |
| build-book: | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| pull-requests: write | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| ref: ${{ github.event.pull_request.head.ref }} | |
| - name: Check TODO/FIXMEs | |
| run: | | |
| #!/bin/bash | |
| # Search TODO/FIXME and strip whitespace | |
| count=$(grep -Rniwo --include="*.qmd" -e 'TODO\|FIXME' book/ | wc -l) | |
| count=$(echo "$count" | sed -e 's/^[[:space:]]*//' -e 's/[[:space:]]*$//') | |
| # Warn if count>0 | |
| if [ "$count" -gt 0 ]; then | |
| echo "::warning::There are $count FIXMEs/TODOs." | |
| fi | |
| shell: bash | |
| - name: Install Quarto | |
| uses: quarto-dev/quarto-actions/setup@v2 | |
| with: | |
| tinytex: true | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| r-version: "4.2.2" | |
| - name: Install rmarkdown | |
| run: Rscript -e 'install.packages("rmarkdown")' | |
| - name: Render book | |
| run: make render | |
| - name: Upload pdf book | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: MLSA | |
| path: book/_book/Machine-Learning-in-Survival-Analysis.pdf | |
| retention-days: 5 | |
| - name: Add & Commit | |
| if: ${{ github.event_name == 'pull_request' }} | |
| uses: EndBug/[email protected] | |
| with: | |
| add: book/_book/Machine-Learning-in-Survival-Analysis.pdf --force | |
| message: "Push pdf [skip ci]" | |
| - name: Comment link to pdf | |
| if: ${{ github.event_name == 'pull_request' }} | |
| uses: thollander/actions-comment-pull-request@v2 | |
| with: | |
| comment_tag: preview | |
| message: | | |
| [Book :open_book:](https://github.com/mlsa-book/MLSA/blob/${{ github.event.pull_request.head.ref }}/book/_book/Machine-Learning-in-Survival-Analysis.pdf) |