Skip to content
test_suite

[DRAFT] Possible implementation of Gotman #590

Sign in to view logs

[DRAFT] Possible implementation of Gotman

[DRAFT] Possible implementation of Gotman #590

Workflow file for this run

.github/workflows/unit_tests.yml at 2e23ba9
name: test_suite
on:
# push:
# branches: [ '**' ]
pull_request:
branches: [ '**' ]
create:
branches: [ master ]
tags: [ '**' ]
schedule:
- cron: "0 4 * * *"
jobs:
style:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [ 3.8 ]
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v1
with:
python-version: ${{ matrix.python-version }}
- name: Install pipenv
run: |
python -m pip install --upgrade pip
python -m pip install --upgrade pipenv wheel
python -m pip install pipfile-requirements
- id: cache-pipenv
uses: actions/cache@v1
with:
path: ~/.local/share/virtualenvs
key: ${{ runner.os }}-pipenv-${{ hashFiles('**/Pipfile.lock') }}
- name: Install dependencies
if: steps.cache-pipenv.outputs.cache-hit != 'true'
run: |
pipfile2req > requirements.txt --dev
pip install -r requirements.txt
- name: Display versions and environment information
run: |
python --version
which python
- name: Run style & documentation tests
run: make pep
build:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ ubuntu-latest, macos-latest ]
python-version: [ 3.6, 3.7, 3.8, 3.9 ]
steps:
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v1
with:
python-version: ${{ matrix.python-version }}
- name: Update pip and wheel
run: python -m pip install --upgrade pip wheel pipenv
- uses: actions/checkout@v2
- name: Build sdist
run: python setup.py sdist
- name: Install sdist
run: pip install ./dist/mne-hfo-*
- name: Clean up working directory
run: rm -rf ./*
- name: Try importing mne_hfo
run: python -c 'import mne_hfo; print(mne_hfo.__version__)'
- name: Remove sdist install
run: pip uninstall -y mne-hfo
- uses: actions/checkout@v2
- name: Build wheel
run: python setup.py bdist_wheel
- name: Install wheel
run: pip install ./dist/mne_hfo-*.whl
- name: Clean up working directory
run: rm -rf ./*
- name: Try importing mne_hfo
run: python -c 'import mne_hfo; print(mne_hfo.__version__)'
- name: Remove wheel install
run: pip uninstall -y mne-hfo
- uses: actions/checkout@v2
- name: Test extras install
run: |
pip install .[full]
python -c 'import mne_hfo; print(mne_hfo.__version__)'
test:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ ubuntu-latest, macos-latest ]
python-version: [ 3.8, 3.9 ]
env:
TZ: Europe/Berlin
FORCE_COLOR: true
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v1
with:
python-version: ${{ matrix.python-version }}
- name: Install Python dependencies using pipenv
run: |
python -m pip install --upgrade pip wheel pipenv
python -m pip install pipfile-requirements
- id: cache-pipenv
uses: actions/cache@v1
with:
path: ~/.local/share/virtualenvs
key: ${{ runner.os }}-pipenv-${{ hashFiles('**/Pipfile.lock') }}
- name: Install dependencies
if: steps.cache-pipenv.outputs.cache-hit != 'true'
run: |
pip install -r requirements.txt
pip install -r test_requirements.txt
- name: Display versions and environment information
run: |
echo $TZ
date
python --version
which python
python -c "import mne; mne.sys_info()"
- name: Install MNE-HFO
run: pip install --no-deps .
- name: Run pytest
run: |
python -m pytest . --cov=mne_hfo --cov-report=xml --cov-config=setup.cfg --verbose --ignore mne-python
shell: bash
- name: Upload coverage stats to codecov
if: "matrix.os == 'ubuntu-latest'"
uses: codecov/codecov-action@v1
with:
file: ./coverage.xml