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Update HAF-pipe for more robustness #107

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Update HAF-pipe for more robustness

Update HAF-pipe for more robustness #107

Re-run triggered December 17, 2024 20:11
@lczechlczech
d4f6516
master
Status Success
Total duration 17m 43s
Artifacts 52

ci.yaml

on: push
Matrix: envs
Matrix: example
Matrix: test
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43 warnings
test (ubuntu-latest, trimming-skewer-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-skewer-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-seqprep-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-none, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-seqprep-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-fastp-3, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-fastp-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-fastp-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-cutadapt-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-cutadapt-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-adapterremoval-3, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-adapterremoval-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, pileup-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-adapterremoval-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mappings-table, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bwa-mem2-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bwa-mem2-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bwa-mem-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bwa-aln-4, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bwa-aln-3, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bwa-aln-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bowtie2-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bwa-aln-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bowtie2-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, hafpipe-4, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, hafpipe-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, hafpipe-3, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, hafpipe-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, duplicates-dedup-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, duplicates-dedup-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-haplotypecaller-3, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-freebayes-3, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-haplotypecaller-4, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-haplotypecaller-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-freebayes-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-haplotypecaller-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-freebayes-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-bcftools-4, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-bcftools-3, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-bcftools-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-bcftools-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, base, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, download, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

Artifacts

Produced during runtime
Name Size
logs-test-ubuntu-latest-download
99.4 KB