Code

Vignettes/variation#225

Code

Merged

pwinskill merged 21 commits intovignettes_updatemrc-ide/malariasimulation:vignettes_updatefrom vignettes/variationmrc-ide/malariasimulation:vignettes/variationCopy head branch name to clipboardMay 24, 2023

+100-61

Commits

Commits on Feb 15, 2023

• First edits to add plotting functions in base R

  kellymccain28

  committed
  00e3b9b

• Updated some plots to base R

  kellymccain28

  committed
  71e78f8

• More plot modifications to avoid ggplot2

  kellymccain28

  committed
  ff529e6

• Removing cowplot dependency and changing last plot to base r

  kellymccain28

  committed
  db6a683

Commits on Feb 21, 2023

• Updating plot rendering

  kellymccain28

  committed
  8095e07

Commits on Feb 23, 2023

• Improved explanations and plots

  kellymccain28

  committed
  b212c28

Commits on Feb 27, 2023

• Fixing formatting, edits to explanations

  kellymccain28

  committed
  45b0d87

Commits on Feb 28, 2023

• adding clarification/explanation

  kellymccain28

  committed
  557c033

• fix y axis label

  kellymccain28

  committed
  ea354a6

Commits on Mar 2, 2023

• Updating plots, editing text, removed p_detect references

  kellymccain28

  committed
  5283b19

• Last minutes updates to the text

  kellymccain28

  committed
  0000e12

• updating to rmarkdown::html_vignette to match other vignettes

  kellymccain28

  committed
  edb9336

Commits on Mar 9, 2023

• added section on parameter variation

  

  lhaile

  committed
  bb25014

Commits on Mar 10, 2023

• Edits from pete/hillary's comments; added incidence plot, cleaned up " vs. ', etc

  kellymccain28

  committed
  3a5af92

• Merge branch 'vignettes/variation' of https://github.com/mrc-ide/malariasimulation into vignettes/variation

  kellymccain28

  committed
  fe02151

• Removed Lydia's section - she will make new vignette

  kellymccain28

  committed
  fd42b12

• changed last plots to plot prevalence / fixed y axes

  kellymccain28

  committed
  2b057d0

Commits on Mar 28, 2023

• remove Estimating stochastic variation, add stochastic elimination

  kellymccain28

  committed
  1583772

Commits on Mar 30, 2023

• Removing unclear sentence

  kellymccain28

  committed
  77b371c

• last edits

  kellymccain28

  committed
  dbd2323

Commits on Apr 21, 2023

• Changed plot so that beginning of sim is not 0% prev

  kellymccain28

  committed
  05da94c