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Add hypnozoites to the P.v model#321

Code

Merged

RJSheppard merged 3 commits intodevmrc-ide/malariasimulation:devfrom vivax_competing_hazards_main_hypnozoitesmrc-ide/malariasimulation:vivax_competing_hazards_main_hypnozoitesCopy head branch name to clipboardOct 22, 2024

+647-222

Commits

Commits on Oct 22, 2024

• Hynozoite batches are now modelled, including formation via bite infections, decay of hypnozoite batches, new infections via relapse and the reseting of batch number to 0 for new births.

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  RJSheppard

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  74b51aa

• Rewritten competing hazards resoltion so that it does not call itself within the function. This also removed the "set_relative_rates" part of the competing hazards, and now we have args, such that …

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  RJSheppard

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  9a78c5b

• Removed code redundancies. Adjusted extra arguments inputted into competing hazards object and reverting to previous competing hazard tests.

  RJSheppard

  committed
  da381b9