Evaluation #246
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| name: Evaluation | |
| on: | |
| workflow_dispatch: | |
| push: | |
| paths: | |
| - '**' | |
| - '!docs/**' | |
| pull_request: | |
| paths: | |
| - '**' | |
| - '!docs/**' | |
| release: | |
| types: [created] | |
| paths: | |
| - '**' | |
| - '!docs/**' | |
| jobs: | |
| compile: | |
| name: Compile SOMA | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v1 | |
| with: | |
| fetch-depth: 1 | |
| - name: Setup Java | |
| uses: actions/setup-java@v3 | |
| with: | |
| distribution: 'temurin' | |
| java-version: '18' | |
| cache: 'maven' | |
| - name: Create directories | |
| run: | | |
| mkdir -p $GITHUB_WORKSPACE/build/owl/current && | |
| mkdir mkdir -p $GITHUB_WORKSPACE/build/files | |
| - name: Compile | |
| run: | | |
| mvn --no-transfer-progress spring-boot:run -f scripts/java/pom.xml \ | |
| -Dspring-boot.run.arguments="--versionInfo=current" | |
| - name: Upload OWL file | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: SOMA OWL | |
| path: ./build/owl/current/SOMA-HOME.owl | |
| - name: Upload OWL files for Documentation | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: SOMA Files for Documentation | |
| path: ./build/owl/current/ | |
| retention-days: 2 | |
| pitfalls: | |
| name: OOPS | |
| runs-on: ubuntu-latest | |
| needs: compile | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 1 | |
| - name: Create directories | |
| run: | | |
| mkdir -p $GITHUB_WORKSPACE/build/owl/current && | |
| mkdir mkdir -p $GITHUB_WORKSPACE/build/files | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: SOMA OWL | |
| path: ./build/owl/current/ | |
| - name: Setup Python | |
| uses: actions/setup-python@v2 | |
| - name: Install python dependencies | |
| run: | | |
| sudo python -m pip install --upgrade pip | |
| sudo pip install requests | |
| - name: Find pitfalls | |
| run: sudo python ./scripts/oops.py $GITHUB_WORKSPACE/build/owl/current/SOMA-HOME.owl $GITHUB_WORKSPACE/build/files | |
| - name: Generate annotations | |
| run: sudo python ./scripts/oops-github.py $GITHUB_WORKSPACE/build/files/oops.xml | |
| - name: Upload pitfalls | |
| uses: actions/upload-artifact@v1 | |
| with: | |
| name: OOPS Results | |
| path: ./build/files/oops.xml | |
| consistency: | |
| name: HermiT | |
| runs-on: ubuntu-latest | |
| needs: compile | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 1 | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: SOMA OWL | |
| path: ./build/owl/current | |
| - name: Download DUL | |
| run: wget http://www.ease-crc.org/ont/DUL.owl -O ./build/DUL.owl | |
| - name: HermiT | |
| uses: ./.github/actions/hermit | |
| with: | |
| args: ./build/DUL.owl ./build/SOMA-HOME.owl | |
| - name: Print HermiT output | |
| run: cat ./hermit.output | |
| if: always() | |
| - name: Evaluate HermiT output | |
| if: success() | |
| uses: docker://python:3.7.6-slim | |
| with: | |
| args: python ./scripts/hermit_test.py -o ./owl/hermit.html ./hermit.output | |