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minor text updates

minor text updates #92

Workflow file for this run

name: Tests
on:
push:
pull_request:
workflow_dispatch:
# When this workflow is queued, automatically cancel any previous running
# or pending jobs from the same branch
concurrency:
group: ${{ github.ref }}
cancel-in-progress: true
# Required shell entrypoint to have properly activated conda environments
defaults:
run:
shell: bash -l {0}
jobs:
test:
runs-on: ${{ matrix.os }}
timeout-minutes: 90
strategy:
fail-fast: false
matrix:
os: ["windows-latest", "ubuntu-latest", "macos-latest"]
environment: ["3.9", "3.10", "3.11", "3.12"]
extra: [null]
exclude:
- os: "macos-latest"
environment: "3.9"
- os: "macos-latest"
environment: "3.10"
- os: "macos-latest"
environment: "3.11"
include:
# Minimum dependencies
- os: "ubuntu-latest"
environment: "mindeps-array"
- os: "ubuntu-latest"
environment: "mindeps-dataframe"
- os: "ubuntu-latest"
environment: "mindeps-distributed"
- os: "ubuntu-latest"
environment: "mindeps-non-optional"
- os: "ubuntu-latest"
environment: "mindeps-optional"
# Pyarrow strings turned on
- os: "ubuntu-latest"
environment: "3.12"
extra: "pyarrow"
env:
PARALLEL: "true"
COVERAGE: "true"
HDF5_USE_FILE_LOCKING: "FALSE"
steps:
- name: Checkout source
uses: actions/[email protected]
with:
fetch-depth: 0 # Needed by codecov.io
- name: Setup Java
uses: actions/setup-java@v4
if: ${{ matrix.os == 'ubuntu-latest' }}
with:
distribution: "zulu"
java-version: "11"
- name: Setup Conda Environment
uses: conda-incubator/[email protected]
with:
miniforge-variant: Mambaforge
miniforge-version: latest
use-mamba: true
channel-priority: strict
environment-file: continuous_integration/environment-${{ matrix.environment }}.yaml
activate-environment: test-environment
auto-activate-base: false
- name: Turn on Pyarrow strings config option
if: ${{ matrix.extra == 'pyarrow' }}
run: |
export DASK_DATAFRAME__CONVERT_STRING="True"
echo "DASK_DATAFRAME__CONVERT_STRING: $DASK_DATAFRAME__CONVERT_STRING"
echo "DASK_DATAFRAME__CONVERT_STRING=$DASK_DATAFRAME__CONVERT_STRING" >> $GITHUB_ENV
- name: Reconfigure pytest-timeout
# No SIGALRM available on Windows
if: ${{ matrix.os != 'windows-latest' }}
run: sed -i.bak 's/timeout_method = "thread"/timeout_method = "signal"/' pyproject.toml
- name: Install
run: source continuous_integration/scripts/install.sh
# This environment file is created in continuous_integration/scripts/install.sh
# and can be useful when debugging locally
- name: Upload environment file
uses: actions/upload-artifact@v3
with:
name: env-${{ matrix.os }}-${{ matrix.environment }}
path: env.yaml
- name: Run tests
run: source continuous_integration/scripts/run_tests.sh
- name: Coverage
uses: codecov/codecov-action@v3