No such keg: /opt/homebrew/Cellar/r

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

dependencies ‘graph’, ‘Biostrings’, ‘seqLogo’, ‘TreeDistData’, ‘Biobase’, ‘MassSpecWavelet’, ‘marray’, ‘affy’, ‘limma’, ‘BiocVersion’, ‘BiocStyle’, ‘starsdata’, ‘spDataLarge’, ‘rnaturalearthhires’, ‘dotwhisker’, ‘Rgraphviz’, ‘taxidata’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘margins’, ‘ComplexHeatmap’, ‘cmdstanr’, ‘glmmADMB’, ‘INLA’, ‘sylly.de’, ‘sylly.es’, ‘biomaRt’, ‘KEGGgraph’, ‘M3C’, ‘globaltest’, ‘prediction’, ‘RandomFields’, ‘cairoDevice’, ‘RGtk2’, ‘snpStats’, ‘SwarmSVM’, ‘gurobi’, ‘rrelaxiv’, ‘ExactData’, ‘sangerseqR’, ‘RDCOMClient’, ‘loe’, ‘RTCGA.rnaseq’, ‘Icens’, ‘rhdf5’, ‘mixOmics’, ‘genefilter’, ‘sva’, ‘IRanges’ are not available

pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config