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vresion number updated and added nucmer
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mshakya committed Aug 3, 2020
1 parent 2457f09 commit ba33708
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions src/phame
Original file line number Diff line number Diff line change
Expand Up @@ -64,7 +64,7 @@ AUTHORS
#...............................................................................
# global variables
my $PACKAGENAME = "PhaME";
my $PACKAGEVERSION = "1.0.5";
my $PACKAGEVERSION = "1.0.6";
my $AUTHORS = "Migun Shakya, Chien-Chi Lo, Sanaa Ahmed";
my $URL = 'https://github.com/LANL-Bioinformatics/PhaME';
my $vcheck = '';
Expand Down Expand Up @@ -288,7 +288,7 @@ print "PhaME v$PACKAGEVERSION \n";
##########################################################################################
# create some necessary directories
my $snpdir = $outdir . '/snps';
my $gapdir = $outdir . '/gaps';
my $gapdir = $outdir . '/nucmer';
my $statdir = $outdir . '/stats';
my $summary = $outdir . '/' . "$project\_genome_lengths.txt";
`mkdir -p $snpdir $gapdir $statdir`;
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