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Update run_param_config.py
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adding "SMARTSeq" recipe to run_param_config script to run RNA stats on samples with the aforementioned recipe
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darrelln32 committed Mar 18, 2024
1 parent e239ec0 commit 30b01ec
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2 changes: 2 additions & 0 deletions scripts/run_param_config.py
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Expand Up @@ -74,6 +74,8 @@ def get_ordered_dic(unordered_dic):
".*SMARTer.*": { TYPE: "RNA" },
"FusionDiscoverySeq": { TYPE: "RNA" },
".*Ribo.*": { TYPE: "RNA" },
"SMART-Seq": { TYPE: "RNA" },
"SMARTSeq": { TYPE: "RNA" },
".*CDH1_RNA.*": { TYPE: "CAPTURE" },
# FOR NEW ENTRIES
# "{regex}": { TYPE: type }
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