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@gongyixiao gongyixiao released this 12 Aug 20:39
· 45 commits to master since this release
1.4
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  1. Enhancement/multiqc format and plot improvements #844
  2. bugfix/aggregate bam statistics #846
  3. enhancement/write cache and memory management for Qualimap and Facets #857
  4. enhancement: Use new neoantigen docker #869
  5. Bugfix/parsealfred genome #871
  6. bugfix/parsing read number in fastq file #865
  7. Enhancement/improve watch detection #858
  8. bugfix/aggregate_from_path #873
  9. bugfix/lable_AggregateLOHHLA #872
  10. bugfix: corrected reference files for knownIndels and knownIndelsIndex #878
  11. Enhancement/combine MergeBams and MarkDuplicates #875
  12. bugfix: changed checkParamReturnFile method #879
  13. bugfix: handled absence of fastp results in multiqc processes #882
  14. Enhancement: combine bqsr processes into one #877
  15. Bugfix/filter strandbias #908
  16. Enhancement/unfiltered vcf #907
  17. Custom targets Custom targets #902
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