Doduo

New Feature:

• yacrd can write report in json if flag -j or --json are set

New PostDetection operation:

• extract : write in name_extracted.{paf|mhap|fasta|fastq} Chimeric and Not_covered read
• spilt: write in name_spilt.{fasta|fastq} part of read with sufficient coverage

Bug correction:

• In PostDetection output name generation in fliterd input is ../something.other/test.fasta output are ../something.other/test_filtred.fasta not ._filtred./something.other/test.fasta