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Merge pull request #76 from zcoman/cellmaskC&D
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Fixed constants being present in membrane.py
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shanrhoads authored Apr 3, 2024
2 parents 573be38 + 59c5aea commit b48e1fa
Showing 1 changed file with 0 additions and 12 deletions.
12 changes: 0 additions & 12 deletions infer_subc/organelles/membrane.py
Original file line number Diff line number Diff line change
Expand Up @@ -4,18 +4,6 @@
from aicssegmentation.core.utils import hole_filling
from infer_subc.organelles.nuclei import infer_nuclei_fromlabel
from infer_subc.organelles.cellmask import non_linear_cellmask_transform
from infer_subc.constants import (
TEST_IMG_N,
NUC_CH,
LYSO_CH,
MITO_CH,
GOLGI_CH,
PEROX_CH,
ER_CH,
LD_CH,
PM_CH,
RESIDUAL_CH,
)

def membrane_composite(in_img: np.ndarray,
weight_ch0: int = 0,
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