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- use neic crypt4gh - do not use pip - silent curls
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#!/bin/bash | ||
set -e | ||
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# Build containers | ||
docker build -t neicnordic/sda-download:latest . || exit 1 | ||
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#!/bin/bash | ||
set -e | ||
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cd dev_utils || exit 1 | ||
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#!/bin/bash | ||
set -e | ||
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C4GH_VERSION="$(curl --retry 100 -sL https://api.github.com/repos/neicnordic/crypt4gh/releases/latest | jq -r '.name')" | ||
curl --retry 100 -sL https://github.com/neicnordic/crypt4gh/releases/download/"${C4GH_VERSION}"/crypt4gh_linux_x86_64.tar.gz | sudo tar -xz -C /usr/bin/ && | ||
sudo chmod +x /usr/bin/crypt4gh | ||
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pip3 install crypt4gh | ||
sudo apt install -y jq s3cmd |
1 change: 1 addition & 0 deletions
1
sda-download/.github/integration/setup/common/23_create_db_entries.sh
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#!/bin/bash | ||
set -e | ||
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cd dev_utils || exit 1 | ||
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3 changes: 1 addition & 2 deletions
3
sda-download/.github/integration/setup/s3/100_s3_storage_setup.sh
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#!/bin/bash | ||
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pip3 install s3cmd | ||
set -e | ||
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cd dev_utils || exit 1 | ||
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2 changes: 1 addition & 1 deletion
2
sda-download/.github/integration/setup/s3notls/99_s3_storage_setup.sh
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@@ -1,6 +1,6 @@ | ||
#!/bin/bash | ||
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pip3 install s3cmd | ||
sudo apt install -y s3cmd | ||
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cd dev_utils || exit 1 | ||
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Original file line number | Diff line number | Diff line change |
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@@ -1,4 +1,5 @@ | ||
#!/bin/bash | ||
set -e | ||
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cd dev_utils || exit 1 | ||
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