Feat/htsget random access - PLACEHOLDER#820

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dbampalikis wants to merge 30 commits intomainfrom feat/htsget-random-access

+1,019-118

Commits on Apr 17, 2024

First step of implementation of backend random/ranged access

pontus
authored and
MalinAhlberg
committed
Linter fixes

pontus
authored and
MalinAhlberg
committed
Run integration tests for s3seekable

pontus
authored and
MalinAhlberg
committed
Verify requested content-range is used

pontus
authored and
MalinAhlberg
committed
Add/correct some performance optimisations

pontus
authored and
MalinAhlberg
committed
Make it possible to configure archive for seekable s3

pontus
authored and
MalinAhlberg
committed
Cosmetic improvements and allow seeking to the end

pontus
authored and
MalinAhlberg
committed
Return EOF when reading at the end

pontus
authored and
MalinAhlberg
committed
Remove unneeded code

pontus
authored and
MalinAhlberg
committed
Only accept seekable readers to SeekableMultiReader

pontus
authored and
MalinAhlberg
committed
Cosmetic improvements and allow seeking to the end

pontus
authored and
MalinAhlberg
committed
Fix test for more data available in SeekableMultiReader

pontus
authored and
MalinAhlberg
committed
Adapt to SeekableMultiReader instantiation being able to fail

pontus
authored and
MalinAhlberg
committed
Updated test for seekable s3 and seekableMultiReader

pontus
authored and
MalinAhlberg
committed
Give more time for stability

pontus
authored and
MalinAhlberg
committed
Lint fix

pontus
authored and
MalinAhlberg
committed
Lint fix

pontus
authored and
MalinAhlberg
committed
Remove spurious log and empty lines

pontus
authored and
MalinAhlberg
committed
Allow waiting for prefetch as a proper code would

pontus
authored and
MalinAhlberg
committed
feat: use seekable reader in file download
MalinAhlberg
committed
feat: set client additional bytes
MalinAhlberg
committed
fix: make sure bytes ranges are inclusive
MalinAhlberg
committed
refactor: move seeker to function
MalinAhlberg
committed
tests: make sure byte ranges are inclusive
MalinAhlberg
committed
fix: add header size to encrypted file size
MalinAhlberg
committed
Remove server public key and rearrange calculate coordinates

dbampalikis
authored and
MalinAhlberg
committed
refactor: clean up code
MalinAhlberg
committed
tests: adjust testing of coords calculation and instatiate headers
MalinAhlberg
committed
refactor: rename caluclateCoords function
MalinAhlberg
committed

Commits on Apr 21, 2024

Simplify TLS config
jbygdell
committed

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Feat/htsget random access - PLACEHOLDER#820

Commits on Apr 17, 2024

First step of implementation of backend random/ranged access

Linter fixes

Run integration tests for s3seekable

Verify requested content-range is used

Add/correct some performance optimisations

Make it possible to configure archive for seekable s3

Cosmetic improvements and allow seeking to the end

Return EOF when reading at the end

Remove unneeded code

Only accept seekable readers to SeekableMultiReader

Cosmetic improvements and allow seeking to the end

Fix test for more data available in SeekableMultiReader

Adapt to SeekableMultiReader instantiation being able to fail

Updated test for seekable s3 and seekableMultiReader

Give more time for stability

Lint fix

Lint fix

Remove spurious log and empty lines

Allow waiting for prefetch as a proper code would

feat: use seekable reader in file download

feat: set client additional bytes

fix: make sure bytes ranges are inclusive

refactor: move seeker to function

tests: make sure byte ranges are inclusive

fix: add header size to encrypted file size

Remove server public key and rearrange calculate coordinates

refactor: clean up code

tests: adjust testing of coords calculation and instatiate headers

refactor: rename caluclateCoords function

Commits on Apr 21, 2024

Simplify TLS config