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Add SDM-PSI Estimator #591

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Add SDM-PSI Estimator #591

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Commits on Nov 18, 2020

  1. Start working on SDM anisotropic kernel.

    @tsalo
    tsalo committed Nov 18, 2020
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Commits on Oct 27, 2021

  1. Merge branch 'neurostuff:main' into sdm

    @tsalo
    tsalo authored Oct 27, 2021
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Commits on Oct 29, 2021

  1. Run black and improve docstring.

    @tsalo
    tsalo committed Oct 29, 2021
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Commits on Dec 19, 2021

  1. Merge branch 'main' into sdm

    @tsalo
    tsalo committed Dec 19, 2021
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  2. Start looking at the Albajes-Eizagirre et al. (2019) supplement.

    @tsalo
    tsalo committed Dec 19, 2021
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Commits on Dec 20, 2021

  1. Improve documentation a bit.

    @tsalo
    tsalo committed Dec 20, 2021
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Commits on Dec 21, 2021

  1. Use PyMARE instead of metafor's rma.

    @tsalo
    tsalo committed Dec 21, 2021
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  2. Get the permutation functions working.

    @tsalo
    tsalo committed Dec 21, 2021
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  3. Draft hedges g function.

    @tsalo
    tsalo committed Dec 21, 2021
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  4. Use formulae from wikipedia for hedges' g.

    @tsalo
    tsalo committed Dec 21, 2021
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  5. Add empty functions for calculating Hedges g to transforms.

    @tsalo
    tsalo committed Dec 21, 2021
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  6. Try improving Hedges g functions.

    @tsalo
    tsalo committed Dec 21, 2021
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Commits on Dec 22, 2021

  1. Add simulation code (thanks @JulioAPeraza!).

    @tsalo
    tsalo committed Dec 22, 2021
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Commits on Jan 14, 2022

  1. Get the simulations working.

    @tsalo
    tsalo committed Jan 14, 2022
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  2. Support different sample sizes per study. 

    Still need to support one-sample studies.
    @tsalo
    tsalo committed Jan 14, 2022
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Commits on Jan 15, 2022

  1. I think the single-voxel imputation makes sense now.

    @tsalo
    tsalo committed Jan 15, 2022
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  2. Lots of progress on the simulations.

    @tsalo
    tsalo committed Jan 15, 2022
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  3. Update sdm.py

    @tsalo
    tsalo committed Jan 15, 2022
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Commits on Jan 16, 2022

  1. Document some stuff.

    @tsalo
    tsalo committed Jan 16, 2022
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  2. Import stuff.

    @tsalo
    tsalo committed Jan 16, 2022
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  3. Update setup.cfg

    @tsalo
    tsalo committed Jan 16, 2022
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  4. Update sdm.py

    @tsalo
    tsalo committed Jan 16, 2022
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  5. Some notes.

    @tsalo
    tsalo committed Jan 16, 2022
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  6. Fix the simulated data.

    @tsalo
    tsalo committed Jan 16, 2022
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  7. Documentation improvements.

    @tsalo
    tsalo committed Jan 16, 2022
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  8. Update sdm.py

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    tsalo committed Jan 16, 2022
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Commits on Jan 18, 2022

  1. Just use the masker to simulate the subject data.

    @tsalo
    tsalo committed Jan 18, 2022
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Commits on Mar 3, 2022

  1. Merge branch 'main' into sdm

    @tsalo
    tsalo committed Mar 3, 2022
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  2. Remove supplement R values.

    @tsalo
    tsalo committed Mar 3, 2022
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  3. Update sdm.py

    @tsalo
    tsalo committed Mar 3, 2022
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  4. Run black.

    @tsalo
    tsalo committed Mar 3, 2022
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Commits on Mar 8, 2022

  1. Merge branch 'main' into sdm

    @tsalo
    tsalo committed Mar 8, 2022
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  2. Update sdm.py

    @tsalo
    tsalo committed Mar 8, 2022
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Commits on Mar 30, 2022

  1. Test out the simulation method. 

    Unfortunately, there's still an issue with most voxels...
    @tsalo
    tsalo committed Mar 30, 2022
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  2. Keep working on the simulation code.

    @tsalo
    tsalo committed Mar 30, 2022
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  3. Add some tests.

    @tsalo
    tsalo committed Mar 30, 2022
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  4. Update sdm.py

    @tsalo
    tsalo committed Mar 30, 2022
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  5. docstrings.

    @tsalo
    tsalo committed Mar 30, 2022
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Commits on May 11, 2022

  1. Try writing _calculate_hedges_maps.

    @tsalo
    tsalo committed May 11, 2022
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  2. Run black.

    @tsalo
    tsalo committed May 11, 2022
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  3. Merge remote-tracking branch 'upstream/main' into sdm

    @tsalo
    tsalo committed May 11, 2022
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  4. Update.

    @tsalo
    tsalo committed May 11, 2022
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  5. Update.

    @tsalo
    tsalo committed May 11, 2022
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  6. Move some functions.

    @tsalo
    tsalo committed May 11, 2022
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  7. More.

    @tsalo
    tsalo committed May 11, 2022
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Commits on May 13, 2022

  1. Update sdm.py

    @tsalo
    tsalo committed May 13, 2022
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Commits on May 14, 2022

  1. Update setup.cfg

    @tsalo
    tsalo committed May 14, 2022
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Commits on May 16, 2022

  1. Update sdm.py

    @tsalo
    tsalo committed May 16, 2022
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  2. Update sdm.py

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    tsalo committed May 16, 2022
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Commits on May 17, 2022

  1. Update test_sdm.py

    @tsalo
    tsalo committed May 17, 2022
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  2. Update sdm.py

    @tsalo
    tsalo committed May 17, 2022
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  3. Update sdm.py

    @tsalo
    tsalo committed May 17, 2022
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  4. Update test_sdm.py

    @tsalo
    tsalo committed May 17, 2022
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Commits on May 18, 2022

  1. Minor stuff from last night.

    @tsalo
    tsalo committed May 18, 2022
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  2. More stuff.

    @tsalo
    tsalo committed May 18, 2022
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Commits on May 19, 2022

  1. Update.

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    tsalo committed May 19, 2022
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Commits on May 23, 2022

  1. Just use PyMARE for the heterogeneity stats.

    @tsalo
    tsalo committed May 23, 2022
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Commits on May 24, 2022

  1. Update sdm.py

    @tsalo
    tsalo committed May 24, 2022
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  2. Update sdm.py

    @tsalo
    tsalo committed May 24, 2022
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Commits on Aug 12, 2022

  1. Merge remote-tracking branch 'upstream/main' into sdm

    @tsalo
    tsalo committed Aug 12, 2022
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  2. [skip ci] Update sdm.py.

    @tsalo
    tsalo committed Aug 12, 2022
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