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[ENH] add pipeline configuration/structure #3

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merged 44 commits into from
Nov 25, 2024
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6fe2bfb
adding testing
jdkent Oct 22, 2024
bbbfc9d
add dependent pipeline
jdkent Oct 24, 2024
60c0978
mark pipeline as (in)dependent
jdkent Oct 24, 2024
89d45f3
wip: start modifying the existing pipeline
jdkent Oct 24, 2024
5e8bafc
merge in new changes
jdkent Oct 24, 2024
90bee39
Restructure package
adelavega Oct 30, 2024
cb16fc9
add filter_inputs function
jdkent Oct 30, 2024
58bc727
Refactor init logic to dataclasses
adelavega Oct 30, 2024
cfff8bb
Both group and independent can use the same function name ('function'…
adelavega Oct 30, 2024
79bfdcc
group_function to function
adelavega Oct 30, 2024
0625124
_hash_attrs instead
adelavega Oct 30, 2024
c26ef1b
Set default _hash_attrs
adelavega Oct 30, 2024
e907624
refactor based on feedback
jdkent Oct 31, 2024
85b20dd
add pipeline name to output path
jdkent Oct 31, 2024
ddd5b67
wip: modify readme
jdkent Oct 31, 2024
23bb537
fix merge
jdkent Oct 31, 2024
c99c83f
add tests dependencies
jdkent Oct 31, 2024
a78f241
add test for participant demographics
jdkent Nov 14, 2024
cdbdec2
opensource data
jdkent Nov 15, 2024
d1e2a31
remove old functions
jdkent Nov 15, 2024
cd5bb83
commit the cassette
jdkent Nov 15, 2024
99095fb
add dependencies
jdkent Nov 15, 2024
ef0b25d
allow installable pyproject
jdkent Nov 15, 2024
0839a6e
move test directory and remove top level __init__
jdkent Nov 15, 2024
585fc21
try underscores
jdkent Nov 15, 2024
5cdfc6d
Revert "allow installable pyproject"
jdkent Nov 15, 2024
306e9ec
Revert "Revert "allow installable pyproject""
jdkent Nov 15, 2024
693cb76
Revert "try underscores"
jdkent Nov 15, 2024
c3b5767
Revert "move test directory and remove top level __init__"
jdkent Nov 15, 2024
8e7152f
remove init
jdkent Nov 15, 2024
20af580
remove old files
jdkent Nov 15, 2024
5cff6be
switch to version 5
jdkent Nov 15, 2024
194e9b1
use editable install
jdkent Nov 15, 2024
6f45fba
trigger variable
jdkent Nov 15, 2024
b6e26b0
add fake key
jdkent Nov 15, 2024
08e534a
Update ns_pipelines/word_count/run.py
jdkent Nov 16, 2024
e8108fd
Update ns_pipelines/participant_demographics/run.py
jdkent Nov 16, 2024
c366e61
Update ns_pipelines/word_count/run.py
jdkent Nov 18, 2024
e1fcd2b
Update ns_pipelines/word_count/run.py
jdkent Nov 18, 2024
01a70f0
Update ns_pipelines/participant_demographics/run.py
jdkent Nov 18, 2024
ce537b8
Update ns_pipelines/word_count/run.py
jdkent Nov 19, 2024
44ad3c6
Update ns_pipelines/word_count/run.py
jdkent Nov 19, 2024
35c09aa
change the names
jdkent Nov 21, 2024
8c5237f
work with .keys file
jdkent Nov 22, 2024
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Update ns_pipelines/participant_demographics/run.py
Co-authored-by: Alejandro de la Vega <aleph4@gmail.com>
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jdkent and adelavega authored Nov 18, 2024
commit 01a70f0d47aea115f175c82551f96083d8022a94
1 change: 0 additions & 1 deletion ns_pipelines/participant_demographics/run.py
Original file line number Diff line number Diff line change
Expand Up @@ -49,7 +49,6 @@ class ParticipantDemographicsExtraction(IndependentPipeline):
"""Participant demographics extraction pipeline."""

_version = "1.0.0"
# _hash_attrs = ["extraction_model", "prompt_set", "kwargs", "_inputs", "_input_sources"]

def __init__(
self,
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