trigger_rebuild_pipeline: Update inputs to match ncov builds

The inputs required to trigger downstream ncov builds were originally
set in Nov 2022 (80e5384).

The downstream ncov builds have since been updated to use different
input files from S3 in April 2023:
1. use aligned.fasta instead of sequences.fasta
2. use zst instead of gz/xz files
3. 21L inputs were updated to aligned.fasta and zst files

This commit updates the inputs for the trigger rule to ensure that the
downstream ncov builds are only triggered after the appropriate files
have been uploaded to S3.

[1] nextstrain/ncov@1376d82
[2] nextstrain/ncov@ad0d1e3
[3] nextstrain/ncov@2323afd

workflow/snakemake_rules/trigger.smk

@@ -14,8 +14,8 @@ These output files are empty flag files to force Snakemake to run the trigger ru
 rule trigger_rebuild_pipeline:
     message: "Triggering nextstrain/ncov rebuild action (via repository dispatch)"
     input:
-        metadata_upload = f"data/{database}/metadata.tsv.gz.upload",
-        fasta_upload = f"data/{database}/sequences.fasta.xz.upload",
+        metadata_upload = f"data/{database}/metadata.tsv.zst.upload",
+        fasta_upload = f"data/{database}/aligned.fasta.zst.upload",
     output:
         touch(f"data/{database}/trigger-rebuild.done")
     params: