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Nyaml2nxdl migration#1303

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sanbrock wants to merge 97 commits intonexusformat:mainnexusformat/definitions:mainfrom FAIRmat-NFDI:nyaml2nxdl-migrationFAIRmat-NFDI/nexus_definitions:nyaml2nxdl-migrationCopy head branch name to clipboard

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Commits

Commits on Oct 7, 2022

• Better dependency management for dev, standalone, and a Nomad install (#50)

  Show description for 9cd55fb
  

  5 peopleauthored
  9cd55fb

Commits on Oct 20, 2022

• Fixes linting

  domna

  committed
  3627be4

Commits on Mar 23, 2023

• Renaming file from yml to yaml

  

  RubelMozumder

  committed
  19f0937

• passing test: test_link, test_docs, test_nxdl2nyaml_doc_from_nxdl, test_fileline_error, test_symnols, test_attributes. test_extends

  

  RubelMozumder

  committed
  86bbc9c

• tests in going on

  

  RubelMozumder

  committed
  4212541

• test_xml_parsing is passed.

  

  RubelMozumder

  committed
  ab1c4ad

• All tests are successfully passed.

  

  RubelMozumder

  committed
  8fb3102

• Setting all the tests, mypy, pydocstyle, and pylint correctly.

  

  RubelMozumder

  committed
  efcd793

Commits on Apr 20, 2023

• Nyaml2nxdl comment preservation (#86)

  Show description for b3db958
  

  RubelMozumder

  and

  RubelMozumder

  authored
  b3db958

Commits on Apr 21, 2023

• Renames to pynxtools (#93)

  Show description for b57695d
  domna

  authored
  b57695d

• Renames to pynxtools (#93)

  Show description for d413881
  domna

  authored
  d413881

Commits on May 8, 2023

• Changes for removing old errors related ':' in yaml and xml file. (#96)

  Show description for cb08bb2
  

  RubelMozumder

  and

  RubelMozumder

  authored
  cb08bb2

• Changes for removing old errors related ':' in yaml and xml file. (#96)

  Show description for 53996da
  

  RubelMozumder

  and

  RubelMozumder

  authored
  53996da

Commits on May 9, 2023

• DEBUG: Deleting intermeadiate generated file. (#109)

  Show description for e0e5509
  

  RubelMozumder

  and

  RubelMozumder

  authored
  e0e5509

• DEBUG: Deleting intermeadiate generated file. (#109)

  Show description for b44c9c3
  

  RubelMozumder

  and

  RubelMozumder

  authored
  b44c9c3

Commits on Jun 13, 2023

• Optionality check in nyam2nxdl (#126)

  Show description for b712dd8
  RubelMozumder

  authored
  b712dd8

• Optionality check in nyam2nxdl (#126)

  Show description for 9da44ee
  RubelMozumder

  authored
  9da44ee

Commits on Jun 15, 2023

• adding links to first references of the vocabulary items

  sanbrock

  committed
  0233d91

• do not display first reference redundantly if it is the only reference

  sanbrock

  committed
  a671d15

• reformatting

  sanbrock

  committed
  124b41e

• changing to shorter link with tooltip

  sanbrock

  committed
  8351366

• linting

  sanbrock

  committed
  1af3a42

• linting

  sanbrock

  committed
  8c0881d

• supporting unicode char for latex

  sanbrock

  committed
  d5faa6b

• short tooltip and link

  sanbrock

  committed
  1138ebf

• adjusted conf.py

  sanbrock

  committed
  cb92872

• removing pynxtools as dependecy

  sanbrock

  committed
  c117842

• linting

  sanbrock

  committed
  185f649

• linting

  sanbrock

  committed
  5a1de22

• imports

  sanbrock

  committed
  286c0c2

Commits on Jun 16, 2023

• Adds pyproject

  domna

  committed
  6837fb6

• Merge pull request nexusformat#1276 from FAIRmat-NFDI/origin/python-package

  Show description for 73d795b
  sanbrock

  authored
  73d795b

• linting

  sanbrock

  committed
  52a21ee

• adjusted default location of definitions inside the module

  sanbrock

  committed
  d3d101f

• new characters as Code Camp suggested

  sanbrock

  committed
  025c078

• make new char available for latex

  sanbrock

  committed
  adf098e

• make new char available for latex

  sanbrock

  committed
  222a3c0

• make new char available for latex

  sanbrock

  committed
  7252a49

• collapsing doc_enum-s

  sanbrock

  committed
  fd4b4a6

• missing sphinx dependency

  sanbrock

  committed
  90ff26b

Commits on Jun 21, 2023

• removing h5py dependency

  sanbrock

  committed
  015aa77

• remove dependencies also from pypi configuration

  sanbrock

  committed
  f2cd2ac

• added sphinx-toolbox

  sanbrock

  committed
  aabf43b

• collapsing is deactivated for this PR

  sanbrock

  committed
  c510dae

Commits on Jul 5, 2023

• Move all of nyaml2nxdl files in a folder

  sherjeelshabih

  committed
  9240450

• Merge branch 'nyaml2nxdl' pulled from https://github.com/FAIRmat-NFDI/pynxtools/

  sherjeelshabih

  committed
  d527d69

• Moving test to correct folder for nexus definitions repo

  sherjeelshabih

  committed
  666203a

• Merge branch 'nyaml2nxdl-tests' into nyaml2nxdl-migration

  sherjeelshabih

  committed
  bd27ec7

Commits on Jul 11, 2023

• Merge remote-tracking branch 'nexus_official/link_first_reference' into nyaml2nxdl-migration

  sherjeelshabih

  committed
  8a9f956

• linting

  

  sanbrock

  authored and

  sherjeelshabih

  committed
  ff05cb5

• linting

  

  sanbrock

  authored and

  sherjeelshabih

  committed
  bf1936a

• imports

  

  sanbrock

  authored and

  sherjeelshabih

  committed
  9c28230

• fixing imports

  

  sanbrock

  authored and

  sherjeelshabih

  committed
  ddaaa69

• test case added

  

  sanbrock

  authored and

  sherjeelshabih

  committed
  357a6a8

Commits on Jul 12, 2023

• Moved over changes from older nyaml PR

  sherjeelshabih

  committed
  948b044

• linting

  sanbrock

  committed
  bd2d198

• make nxdl command is added to support the reverse covertsion that was requested during code camp

  sanbrock

  committed
  1e959c0

• fixing typos and dependencies

  sanbrock

  committed
  0f4d723

Commits on Jul 14, 2023

• add again the lost function remove_namespace_from_tag

  sanbrock

  committed
  020175f

Commits on Jul 18, 2023

• fixing imports

  

  sanbrock

  authored and

  sherjeelshabih

  committed
  e036a01

Commits on Sep 4, 2023

• Modification for changes request from 1303 PR.

  RubelMozumder

  committed
  66c20a6

Commits on Sep 6, 2023

• changes from Peter and Pete.

  RubelMozumder

  committed
  4d3d8f5

Commits on Sep 21, 2023

• Change request in nyaml2nxdl_backward_tools.py

  RubelMozumder

  committed
  6df73b8

Commits on Sep 22, 2023

• nyaml2nxdl backward tools: fixing requested changes in that file.

  RubelMozumder

  committed
  c51291f

• Updating nyaml2nxdl.py with '--do-not-store-nxdl'

  RubelMozumder

  committed
  46c9560

• Removed unused and not functioned functions ('append_yaml', 'compaire_niac_and_my'), and CLI options.

  RubelMozumder

  committed
  031c423

Commits on Sep 25, 2023

• Updating nyaml_forward_tools.py.

  RubelMozumder

  committed
  d702250

• Improved Makefile from fairmat branch

  domna

  committed
  31d1ce3

• Removes unused code

  domna

  committed
  6ceaebd

• Addresses some review comments in nxdl_utils

  domna

  committed
  b52cf08

• Addresses comments in nxdl_utils

  domna

  committed
  a5233c7

• Fixes typo in readme

  domna

  committed
  6149993

• Updating nyam2nxdl converter files.

  RubelMozumder

  committed
  e56c7d5

• Fix typo in setuptools_scm

  domna

  committed
  b276962

• Resolving requested changes.

  RubelMozumder

  committed
  8b8d4de

Commits on Sep 26, 2023

• Fixing attributes for nxdl and yaml separately.

  RubelMozumder

  committed
  96b146f

Commits on Sep 27, 2023

• REsolving PR comments

  RubelMozumder

  committed
  9c49d8a

Commits on Sep 28, 2023

• Fixes Makefile pickung up nxdl rules for make nyaml

  domna

  committed
  1fa5665

• Updating PR comments.

  RubelMozumder

  committed
  b6761e9

• updating PR comments.

  RubelMozumder

  committed
  a0f6a3f

• updating PR comments.

  RubelMozumder

  committed
  9516065

• updating PR comments.

  RubelMozumder

  committed
  d315dab

Commits on Oct 4, 2023

• Replacing os, and xml from dependencies and add lxml and pathlib as dependencies.

  RubelMozumder

  committed
  330975b

• updating PR comments.

  RubelMozumder

  committed
  cf9b9f0

• Implementing black on nyal2nxdl converter files.

  RubelMozumder

  committed
  86df4ed

Commits on Oct 5, 2023

• Fixing test.

  RubelMozumder

  committed
  55ee9ad

• Fixing build errors.

  RubelMozumder

  committed
  cf7f068

Commits on Oct 20, 2023

• Remove pyproject.toml and adapt makefile

  domna

  committed
  ae0bd30

Commits on Oct 25, 2023

• Remove $(DIRS) from nyaml command

  domna

  committed
  afabe9d

• Updates a warning for using make nxdl

  domna

  committed
  31e836d

• Fix codestyle

  domna

  committed
  89afa8e

• Build nxdl names from existing variables

  domna

  committed
  56f5191

Commits on Oct 30, 2023

• Fixing indentation miss alignment in comments commeing from nxdl to nyaml.

  RubelMozumder

  committed
  e616851

Commits on Nov 3, 2023

• Fixing test for python backward compatibility.

  RubelMozumder

  committed
  ebc61c2

Commits on Nov 8, 2023

• Update README.md

  Show description for 8b64f95
  sanbrock

  authored
  8b64f95

Commits on Nov 9, 2023

• Update README.md

  Show description for 124de30
  sanbrock

  authored
  124de30

Commits on Nov 21, 2023

• typos fixed as suggested

  sanbrock

  authored
  4ea35ef