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Change Samtools/view to use same container as all other samtools modules #7058

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Change Samtools/view to use same container as all other samtools modules #7058

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4 changes: 2 additions & 2 deletions modules/nf-core/samtools/view/main.nf
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Original file line number Diff line number Diff line change
Expand Up @@ -4,8 +4,8 @@ process SAMTOOLS_VIEW {

conda "${moduleDir}/environment.yml"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/9e/9edc2564215d5cd137a8b25ca8a311600987186d406b092022444adf3c4447f7/data' :
'community.wave.seqera.io/library/htslib_samtools:1.21--6cb89bfd40cbaabf' }"
'https://depot.galaxyproject.org/singularity/samtools:1.21--h50ea8bc_0' :
'biocontainers/samtools:1.21--h50ea8bc_0' }"

input:
tuple val(meta), path(input), path(index)
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