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Changed Cutadapt to use nf-core modules #1342

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Changed Cutadapt to use nf-core modules

Changed Cutadapt to use nf-core modules #1342

Run time

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Job Run time
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
5m 34s
Run pipeline with test data (23.04.0)
6m 1s
Test workflow parameters (--consensus_caller ivar)
4m 42s
Test workflow parameters (--consensus_caller ivar)
4m 42s
Test workflow parameters (--consensus_caller ivar)
6m 52s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test workflow parameters (--consensus_caller ivar)
25m 53s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)
24m 27s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
4m 44s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
4m 44s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
4m 44s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
4m 44s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
24m 7s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
24m 7s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
24m 7s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
24m 7s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
24m 7s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
24m 7s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
24m 7s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
24m 7s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
24m 7s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)
24m 7s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...
27m 23s
Test workflow parameters (--skip_fastp --skip_pangolin)
4m 43s
Test workflow parameters (--skip_fastp --skip_pangolin)
4m 43s
Test workflow parameters (--skip_fastp --skip_pangolin)
4m 43s
Test workflow parameters (--skip_fastp --skip_pangolin)
4m 43s
Test workflow parameters (--skip_fastp --skip_pangolin)
4m 43s
Test workflow parameters (--skip_fastp --skip_pangolin)
6m 32s
Test workflow parameters (--skip_fastp --skip_pangolin)
5m 48s
Test workflow parameters (--skip_fastp --skip_pangolin)
6m 9s
Test workflow parameters (--skip_fastp --skip_pangolin)
5m 19s
Test workflow parameters (--skip_fastp --skip_pangolin)
5m 19s
Test workflow parameters (--skip_fastp --skip_pangolin)
5m 19s
Test workflow parameters (--skip_fastp --skip_pangolin)
5m 30s
Test workflow parameters (--skip_fastp --skip_pangolin)
5m 30s
Test workflow parameters (--skip_fastp --skip_pangolin)
4m 27s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)
27m 15s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 41s
Test workflow parameters (--skip_variants)
4m 12s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Test Nanopore workflow (--min_barcode_reads 10000)
1m 53s
Run pipeline with test data (latest-everything)
5m 16s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Run pipeline with test data (latest-everything)
23m 43s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 42s
Test workflow parameters (--skip_cutadapt --skip_snpeff)
4m 29s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test Nanopore workflow (--min_guppyplex_reads 10000)
4m 1s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
4m 25s
Test workflow parameters (--skip_kraken2)
6m 45s
Test workflow parameters (--skip_kraken2)
4m 26s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 41s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 33s
Test workflow parameters (--skip_assembly)
4m 27s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test SISPA workflow (--gff false)
14m 29s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...
32m 16s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 37s
Test workflow parameters (--spades_mode corona)
4m 27s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test SISPA workflow (--genome 'NC_045512.2')
15m 19s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 44s
Test workflow parameters (--spades_mode metaviral)
4m 28s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 42s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)
4m 28s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 41s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 41s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 41s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 41s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 41s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 41s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 41s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 41s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 41s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 41s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
1s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
1s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
1s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)
4m 19s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
4m 41s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
4m 41s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
4m 41s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
4m 41s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
4m 41s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
4m 41s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
4m 41s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
4m 41s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
4m 41s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
25m 50s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
25m 50s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
25m 50s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
25m 50s
Test workflow parameters (--bowtie2_index ./GCA_009858895.3_ASM985889v3_genomic.200409.bt2.index....
25m 50s
2d 22h 19m 47s