SNP dataset for the manuscript "Introgression at the emerging secondary contact zone of magpie Pica pica subspecies (Aves: Corvidae): integrating data on nuclear and mitochondrial markers, vocalizations and field observations".
Meta-information for each sample in the VCF file populations.snps_filtered.vcf.gz, which contains polymorphic sites from ddRAD seqencing, can be found in the corresponding Excel Table SampleSheet_Plate_Pica_20180704.xlsx.
Information on the sequencing protocol, the ddRAD library preparation and bioinformatic analyses can be found in the document ddRAD_README.pdf).