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mattfidler committed Sep 23, 2024
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2 changes: 1 addition & 1 deletion README.Rmd
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Expand Up @@ -102,7 +102,7 @@ mod <- nlmixr(nlmixrFun, nlmmixrData, est="monolix")

## NONMEM example

With babelmixr2 loadid you can use `nlmixr2` to convert a nlmixr2
With babelmixr2 loaded you can use `nlmixr2` to convert a nlmixr2
model to NONMEM, run NONMEM and import back to nlmixr2 with the
following:

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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -97,7 +97,7 @@ mod <- nlmixr(nlmixrFun, nlmmixrData, est="monolix")

## NONMEM example

With babelmixr2 loadid you can use `nlmixr2` to convert a nlmixr2 model
With babelmixr2 loaded you can use `nlmixr2` to convert a nlmixr2 model
to NONMEM, run NONMEM and import back to nlmixr2 with the following:

``` r
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66 changes: 55 additions & 11 deletions inst/WORDLIST
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Expand Up @@ -5,23 +5,41 @@ Cmax
CodeFactor
Codecov
DV
Ds
ETAs
FIM
FO
FOCE
FOCEI
FOI
Fedorov
ISCALE
Iaccept
Isample
LatinHyperCube
Loc
MAPINTER
MCC
Minimizer
Monolix
Monolix’
NCA
NOABORT
NONMEM
NONMEM's
NumPoints
ODEs
OFV
PFIM
PKNCA
PKNCAresults
PopED
Poped
PreciseSums
RSE
RxODE
SAEM
StepSize
TimeIndexer
Tmax
UI
VPC
Expand All @@ -30,53 +48,78 @@ adm
advan
al
amtu
atol
babelmixr
bblDatToMonolix
bfgs
bioavailability
cancelled
clearanceu
cllast
cmax
cov
det
dn
doi
dvid
dvu
env
et
evid
exploratoryAutoStop
fedorov
fim
firstStage
focei
foceiFit
foceiPreProcessData
fullABC
groupsize
ie
indexs
inv
iwres
ka
laplace
largeMat
liblsoda
linearized
lixoftConnectors
lixoftConnectors’
lnD
loc
matlab
maxeval
maxmt
mc
mcc
minxt
monolix
mrgsolve
mpi
mtimes
nca
nlmix
nlmixr
nlmixr's
nlmixrDataToMrgsolve
nlmixrDataToNonmem
nlmixrDataToRxode
nlmixrMuDerCov
nmfe
nonmem
num
objf
optimality
pharmacokinetic
pharmacometric
pknca
popEd
poped
popedControl
popedInput
posthoc
psp
reducedFIMABC
reducedPFIM
rse
rtol
rxControl
rxode
saem
sigdig
sigl
tableControl
th
timeu
tmax
Expand All @@ -87,3 +130,4 @@ volumeu
vp
vpc
warfarin
xt
1 change: 1 addition & 0 deletions vignettes/articles/PopED.Rmd
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Expand Up @@ -170,6 +170,7 @@ solvers](https://andrewhooker.github.io/PopED/articles/model_def_other_pkgs.html
- take the model described and adapt it in two different `rxode2`
model functions, the solved and ode cases (this is done by the
`nlmixr()` call which creates a `PopED` database)

- compare these examples to the pharmacometric solvers in the PopED
vignette (`mrgsolve` and `PKPDsim`)

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