v0.1.5

babelmixr2 0.1.5

• Fix bug where PopED could error with certain dvid values

• Fix bug where if/else clauses in the model could cause the model to
  not predict the values correctly in 'PopED`

• Fix bug so that shrinkage() calculation works in PopED

• Fix bug so that you can mix 2 different PopED data bases in an
  analysis without crashing R. While this didn't occur with every
  database clash, it more frequently occurred when you interleaved
  PopED code between two different PopED databases, like in issue
  #131.

• Added a new function babelBpopIdx(poped.db, "par") which will get
  the poped index for a model generated from babelmixr2, which is
  useful when calculating the power (as in example 11).

What's Changed

• 124 poped pref by @mattfidler in #125
• Pull request for lhs by @mattfidler in #128
• Fix babelmixr2 handling of shrinkage() again by @mattfidler in #132
• Allow mixing of poped models by @mattfidler in #133
• Fix doc by @mattfidler in #134
• Add babelBpopIdx by @mattfidler in #136
• Add PopED win parallel by @mattfidler in #141
• Fix G_xt in event table by @mattfidler in #142
• Update pointers at the beginning of each exported fn by @mattfidler in #143
• Poped examples tp by @mattfidler in #144

Full Changelog: v0.1.4...v0.1.5

v0.1.4

v0.1.4

• Added experimental PopED integration
• Removed dependence on rxode2parse
• Imported monolix2rx from the monolix2rx package
• Also allow conversion of a model imported from monolix to a nlmixr2 fit.

What's Changed

• 103 poped interface by @mattfidler in #104
• 108 dont run nonmem or monolix just create files by @mattfidler in #109
• 111 remove rxode2parse by @mattfidler in #112
• Fix the NA runCommand that doesn't work as advertised by @mattfidler in #114
• Move PopED here by @mattfidler in #117
• 117 move poped by @mattfidler in #118
• Support different sampling times per group with separate IDs by @mattfidler in #119
• Script output for different designs by @mattfidler in #121
• as.nlmixr2 for monolix2rx objects by @mattfidler in #105
• rxUiDeparse by @mattfidler in #123

Full Changelog: v0.1.2...v0.1.4

v0.1.2

• Handle algebraic mu expressions

• PKNCA controller now contains rxControl since it is used for some
  translation options

• This revision will load the pruned ui model to query the compartment
  properties (i.e. bioavailability, lag time, etc) when writing out the
  NONMEM model. It should fix issues where the PK block does not
  define some of the variables and will have a larger calculated
  variable that can be used in the model instead.

• When nonmem2rx has a different lst file, as long as
  nonmem2rx::nminfo(file) works, then a successful conversion to a
  nlmixr2 fit object will occur.

• Fix to save parameter history into $parHistData to accommodate
  changes in focei's output ($parHist is now derived).

• Changed the solving options to match the new steady state options in
  rxode2 and how NONMEM implements them. Also changed the iwres
  model to account for the rxerr. instead of the err. which was
  updated in rxode2 as well.

What's Changed

• 87 safezero=false for nonmem maybe even monolix by @mattfidler in #88
• 89 bioavailability calculation not set before bioavailability nonmem line of code by @mattfidler in #90
• Update ssLag by @mattfidler in #93
• Build fix by @billdenney in #98
• Add vignette for PKNCA estimation by @billdenney in #97

Full Changelog: v0.1.1...v0.1.2

v0.1.1

babelmixr2 0.1.1

• Add new method as.nlmixr2 to convert nonmem2rx methods to nlmixr fits

• Dropped pmxTools in favor of nonmem2rx to conserve some of the
  methods

What's Changed

• Centralize the reexports (and fix a documentation warning) by @billdenney in #61
• Issue 65 by @mattfidler in #66
• Change check by @mattfidler in #68
• Add handle for as.nlmixr2 by @mattfidler in #77
• Add timing info for as.nlmixr2 by @mattfidler in #79
• Add the output to the $subroutines record by @mattfidler in #80

Full Changelog: v.0.1.0...v0.1.1

v0.1.0

Allow multiple methods for submission

• Babelmixr has support for “monolix”, “nonmem”, and “pknca” methods on release.