get r version info macos-13

nmfs-ost · Apr 15, 2024 · 3856cf3 · 3856cf3
1 parent 8a1ef8b
commit 3856cf3
Showing 1 changed file with 39 additions and 36 deletions.
diff --git a/.github/workflows/test-models-mac-14.yml b/.github/workflows/test-models-mac-14.yml
@@ -4,7 +4,7 @@ on:
 
 jobs:
   update-ss3-test-models-mac:
-    runs-on: macos-12
+    runs-on: macos-13
     env:
       R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
@@ -17,40 +17,43 @@ jobs:
 
       - name: setup R  
         uses: r-lib/actions/setup-r@v2
+
+      - name: R.version
+        run: Rscript -e 'R.version'
 
-      - name: install remotes
-        run: Rscript -e 'install.packages("remotes")'
-
-      - name: install r4ss
-        run: Rscript -e 'remotes::install_github("r4ss/r4ss")'
-
-      - name: install other r packages
-        run: Rscript -e 'install.packages(c("purrr","furrr","parallely","future"))'
-
-      - name: use download artifact
-        uses: actions/download-artifact@v4
-        with:
-          name: ss3-macos-13
-          github-token: ${{ secrets.GITHUB_TOKEN}} # token with actions:read permissions on target repo
-          repository: nmfs-ost/ss3-source-code
-          run-id: 8664716853
-
-      - name: Change exe name
-        run: |
-          mv ss3_osx ss3
-          sudo chmod a+x ss3
-          mv ss3 models/ss3
-
-      - name: Run models
-        run: |
-          mod_names <- list.dirs(file.path("models"), full.names = FALSE, recursive = FALSE)
-          mod_paths <- list.dirs(file.path("models"), full.names = TRUE, recursive = FALSE)
-          print(mod_names)
-
-          ncores <- parallelly::availableCores(omit = 1)
-          future::plan(future::multisession, workers = ncores)
-
-          mod_ran <- furrr::future_map(mod_paths, function(x){r4ss::run(dir = x, exe = "/Users/runner/work/ss3-test-models/ss3-test-models/models/ss3", verbose = TRUE)})
+      # - name: install remotes
+      #   run: Rscript -e 'install.packages("remotes")'
+
+      # - name: install r4ss
+      #   run: Rscript -e 'remotes::install_github("r4ss/r4ss")'
+
+      # - name: install other r packages
+      #   run: Rscript -e 'install.packages(c("purrr","furrr","parallely","future"))'
+
+      # - name: use download artifact
+      #   uses: actions/download-artifact@v4
+      #   with:
+      #     name: ss3-macos-13
+      #     github-token: ${{ secrets.GITHUB_TOKEN}} # token with actions:read permissions on target repo
+      #     repository: nmfs-ost/ss3-source-code
+      #     run-id: 8664716853
+
+      # - name: Change exe name
+      #   run: |
+      #     mv ss3_osx ss3
+      #     sudo chmod a+x ss3
+      #     mv ss3 models/ss3
+
+      # - name: Run models
+      #   run: |
+      #     mod_names <- list.dirs(file.path("models"), full.names = FALSE, recursive = FALSE)
+      #     mod_paths <- list.dirs(file.path("models"), full.names = TRUE, recursive = FALSE)
+      #     print(mod_names)
+
+      #     ncores <- parallelly::availableCores(omit = 1)
+      #     future::plan(future::multisession, workers = ncores)
+
+      #     mod_ran <- furrr::future_map(mod_paths, function(x){r4ss::run(dir = x, exe = "/Users/runner/work/ss3-test-models/ss3-test-models/models/ss3", verbose = TRUE)})
 
-          print(mod_ran)
-        shell: Rscript {0}
+      #     print(mod_ran)
+      #   shell: Rscript {0}