Julia Dependency Update (#309)

Automated changes by [create-pull-request](https://github.com/peter-evans/create-pull-request) GitHub action
ntumitolab · Feb 12, 2024 · 38c9dcb · 38c9dcb
1 parent c11ac8f
commit 38c9dcb
Showing 1 changed file with 43 additions and 41 deletions.
diff --git a/Manifest.toml b/Manifest.toml
@@ -77,9 +77,9 @@ version = "1.1.0"
 
 [[deps.BandedMatrices]]
 deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"]
-git-tree-sha1 = "3ac52471386dfcc0f6a3c8aeb37ed37c37701128"
+git-tree-sha1 = "931f3f49902e9b6b527fd7cd02d1cd7b4a84264c"
 uuid = "aae01518-5342-5314-be14-df237901396f"
-version = "1.4.1"
+version = "1.5.0"
 weakdeps = ["SparseArrays"]
 
     [deps.BandedMatrices.extensions]
@@ -179,9 +179,9 @@ version = "13.5.1"
 
 [[deps.ChainRulesCore]]
 deps = ["Compat", "LinearAlgebra"]
-git-tree-sha1 = "1287e3872d646eed95198457873249bd9f0caed2"
+git-tree-sha1 = "ad25e7d21ce10e01de973cdc68ad0f850a953c52"
 uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
-version = "1.20.1"
+version = "1.21.1"
 weakdeps = ["SparseArrays"]
 
     [deps.ChainRulesCore.extensions]
@@ -282,9 +282,9 @@ version = "0.2.3"
 
 [[deps.ConcurrentUtilities]]
 deps = ["Serialization", "Sockets"]
-git-tree-sha1 = "8cfa272e8bdedfa88b6aefbbca7c19f1befac519"
+git-tree-sha1 = "9c4708e3ed2b799e6124b5673a712dda0b596a9b"
 uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb"
-version = "2.3.0"
+version = "2.3.1"
 
 [[deps.ConstructionBase]]
 deps = ["LinearAlgebra"]
@@ -353,9 +353,9 @@ version = "1.9.1"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"]
-git-tree-sha1 = "6af33c2eb7478db06bcf5c810e6f3dda53aac2ac"
+git-tree-sha1 = "fefc2eeabecb745f1b1e1f91634381f7c81bd75d"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.146.0"
+version = "6.146.1"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseChainRulesCoreExt = "ChainRulesCore"
@@ -390,9 +390,9 @@ weakdeps = ["OrdinaryDiffEq", "Sundials"]
 
 [[deps.DiffEqNoiseProcess]]
 deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"]
-git-tree-sha1 = "319377c927a4aa1f491228b2ac23f3554a3497c6"
+git-tree-sha1 = "3d440ee25f48e5c7b08af71f2997daca45bf6856"
 uuid = "77a26b50-5914-5dd7-bc55-306e6241c503"
-version = "5.20.0"
+version = "5.20.1"
 
     [deps.DiffEqNoiseProcess.extensions]
     DiffEqNoiseProcessReverseDiffExt = "ReverseDiff"
@@ -512,9 +512,9 @@ version = "2.5.0+0"
 
 [[deps.ExponentialUtilities]]
 deps = ["Adapt", "ArrayInterface", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "PrecompileTools", "Printf", "SparseArrays", "libblastrampoline_jll"]
-git-tree-sha1 = "602e4585bcbd5a25bc06f514724593d13ff9e862"
+git-tree-sha1 = "fd97b2f33cb0f1c8e3e0e96ac6825e62b4b5ab44"
 uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18"
-version = "1.25.0"
+version = "1.26.0"
 
 [[deps.ExprTools]]
 git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec"
@@ -646,9 +646,9 @@ version = "0.1.3"
 
 [[deps.Functors]]
 deps = ["LinearAlgebra"]
-git-tree-sha1 = "9a68d75d466ccc1218d0552a8e1631151c569545"
+git-tree-sha1 = "166c544477f97bbadc7179ede1c1868e0e9b426b"
 uuid = "d9f16b24-f501-4c13-a1f2-28368ffc5196"
-version = "0.4.5"
+version = "0.4.7"
 
 [[deps.Future]]
 deps = ["Random"]
@@ -779,13 +779,13 @@ weakdeps = ["Unitful"]
     InterpolationsUnitfulExt = "Unitful"
 
 [[deps.IntervalSets]]
-deps = ["Dates", "Random"]
-git-tree-sha1 = "3d8866c029dd6b16e69e0d4a939c4dfcb98fac47"
+git-tree-sha1 = "581191b15bcb56a2aa257e9c160085d0f128a380"
 uuid = "8197267c-284f-5f27-9208-e0e47529a953"
-version = "0.7.8"
-weakdeps = ["Statistics"]
+version = "0.7.9"
+weakdeps = ["Random", "Statistics"]
 
     [deps.IntervalSets.extensions]
+    IntervalSetsRandomExt = "Random"
     IntervalSetsStatisticsExt = "Statistics"
 
 [[deps.InvertedIndices]]
@@ -828,10 +828,10 @@ uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8"
 version = "3.0.1+0"
 
 [[deps.JuliaFormatter]]
-deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"]
-git-tree-sha1 = "8f5295e46f594ad2d8652f1098488a77460080cd"
+deps = ["CSTParser", "Combinatorics", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"]
+git-tree-sha1 = "bf3bdb6d310b8106fa13f69eb9cd9c6a53b82b5b"
 uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899"
-version = "1.0.45"
+version = "1.0.47"
 
 [[deps.JumpProcesses]]
 deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "UnPack"]
@@ -1225,9 +1225,9 @@ version = "1.2.0"
 
 [[deps.NonlinearSolve]]
 deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "LazyArrays", "LineSearches", "LinearAlgebra", "LinearSolve", "MaybeInplace", "PrecompileTools", "Preferences", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "TimerOutputs"]
-git-tree-sha1 = "323d2a61f4adc4dfe404bf332b59690253b4f4f2"
+git-tree-sha1 = "2d0fff5b88cb528c7c908eb2421f77658fc70344"
 uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
-version = "3.5.3"
+version = "3.5.4"
 
     [deps.NonlinearSolve.extensions]
     NonlinearSolveBandedMatricesExt = "BandedMatrices"
@@ -1298,9 +1298,9 @@ version = "0.5.5+0"
 
 [[deps.Optim]]
 deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "MathOptInterface", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"]
-git-tree-sha1 = "47fea72de134f75b105a5d4a1abe5c6aec89d390"
+git-tree-sha1 = "d024bfb56144d947d4fafcd9cb5cafbe3410b133"
 uuid = "429524aa-4258-5aef-a3af-852621145aeb"
-version = "1.9.1"
+version = "1.9.2"
 
 [[deps.Opus_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@@ -1378,9 +1378,9 @@ version = "1.4.0"
 
 [[deps.Plots]]
 deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"]
-git-tree-sha1 = "38a748946dca52a622e79eea6ed35c6737499109"
+git-tree-sha1 = "c4fa93d7d66acad8f6f4ff439576da9d2e890ee0"
 uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
-version = "1.40.0"
+version = "1.40.1"
 
     [deps.Plots.extensions]
     FileIOExt = "FileIO"
@@ -1428,9 +1428,9 @@ version = "0.2.4"
 
 [[deps.PreallocationTools]]
 deps = ["Adapt", "ArrayInterface", "ForwardDiff"]
-git-tree-sha1 = "64bb68f76f789f5fe5930a80af310f19cdafeaed"
+git-tree-sha1 = "b6665214f2d0739f2d09a17474dd443b9139784a"
 uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46"
-version = "0.4.17"
+version = "0.4.20"
 
     [deps.PreallocationTools.extensions]
     PreallocationToolsReverseDiffExt = "ReverseDiff"
@@ -1606,12 +1606,13 @@ version = "0.6.42"
 
 [[deps.SciMLBase]]
 deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"]
-git-tree-sha1 = "75bae786dc8b07ec3c2159d578886691823bcb42"
+git-tree-sha1 = "850d187a1123683aa7e593d474155e132584fb78"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.23.1"
+version = "2.24.0"
 
     [deps.SciMLBase.extensions]
     SciMLBaseChainRulesCoreExt = "ChainRulesCore"
+    SciMLBaseMakieExt = "Makie"
     SciMLBasePartialFunctionsExt = "PartialFunctions"
     SciMLBasePyCallExt = "PyCall"
     SciMLBasePythonCallExt = "PythonCall"
@@ -1621,6 +1622,7 @@ version = "2.23.1"
     [deps.SciMLBase.weakdeps]
     ChainRules = "082447d4-558c-5d27-93f4-14fc19e9eca2"
     ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
+    Makie = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a"
     PartialFunctions = "570af359-4316-4cb7-8c74-252c00c2016b"
     PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0"
     PythonCall = "6099a3de-0909-46bc-b1f4-468b9a2dfc0d"
@@ -1671,15 +1673,17 @@ version = "1.1.0"
 
 [[deps.SimpleNonlinearSolve]]
 deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "MaybeInplace", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"]
-git-tree-sha1 = "470c5f97af31fa35926b45eb01e53a46c8d7d35f"
+git-tree-sha1 = "87c13d788c01aba75a66d1129b1a600860ad73a5"
 uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7"
-version = "1.3.1"
+version = "1.4.1"
 
     [deps.SimpleNonlinearSolve.extensions]
+    SimpleNonlinearSolveChainRulesCoreExt = "ChainRulesCore"
     SimpleNonlinearSolvePolyesterForwardDiffExt = "PolyesterForwardDiff"
     SimpleNonlinearSolveStaticArraysExt = "StaticArrays"
 
     [deps.SimpleNonlinearSolve.weakdeps]
+    ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
     PolyesterForwardDiff = "98d1487c-24ca-40b6-b7ab-df2af84e126b"
     StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
 
@@ -1744,9 +1748,9 @@ weakdeps = ["ChainRulesCore"]
 
 [[deps.Static]]
 deps = ["IfElse"]
-git-tree-sha1 = "f295e0a1da4ca425659c57441bcb59abb035a4bc"
+git-tree-sha1 = "d2fdac9ff3906e27f7a618d47b676941baa6c80c"
 uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3"
-version = "0.8.8"
+version = "0.8.10"
 
 [[deps.StaticArrayInterface]]
 deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"]
@@ -1863,19 +1867,17 @@ uuid = "d1185830-fcd6-423d-90d6-eec64667417b"
 version = "1.5.0"
 
 [[deps.Symbolics]]
-deps = ["ArrayInterface", "Bijections", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "RecipesBase", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils"]
-git-tree-sha1 = "ab1785cd8cbfa6cc26af3efa491fd241aa69855e"
+deps = ["ArrayInterface", "Bijections", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "ForwardDiff", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "RecipesBase", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils"]
+git-tree-sha1 = "3cc7df4d9bf8c1e1fb4400c2e73af105dcd2bbb0"
 uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7"
-version = "5.16.1"
+version = "5.17.0"
 
     [deps.Symbolics.extensions]
-    SymbolicsForwardDiffExt = "ForwardDiff"
     SymbolicsGroebnerExt = "Groebner"
-    SymbolicsPreallocationToolsExt = ["ForwardDiff", "PreallocationTools"]
+    SymbolicsPreallocationToolsExt = "PreallocationTools"
     SymbolicsSymPyExt = "SymPy"
 
     [deps.Symbolics.weakdeps]
-    ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
     Groebner = "0b43b601-686d-58a3-8a1c-6623616c7cd4"
     PreallocationTools = "d236fae5-4411-538c-8e31-a6e3d9e00b46"
     SymPy = "24249f21-da20-56a4-8eb1-6a02cf4ae2e6"