Julia Dependency Update (#280)

Automated changes by [create-pull-request](https://github.com/peter-evans/create-pull-request) GitHub action
ntumitolab · Dec 14, 2023 · eaa11b2 · eaa11b2
1 parent 4728760
commit eaa11b2
Showing 1 changed file with 56 additions and 34 deletions.
diff --git a/Manifest.toml b/Manifest.toml
@@ -83,9 +83,9 @@ version = "7.6.1"
 
 [[deps.ArrayLayouts]]
 deps = ["FillArrays", "LinearAlgebra"]
-git-tree-sha1 = "af43df5704827c8618afd36eb56fcab20d3041ee"
+git-tree-sha1 = "e2a63c49d6ed91065ae3e892b0382495a5ad45e3"
 uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a"
-version = "1.4.3"
+version = "1.4.4"
 weakdeps = ["SparseArrays"]
 
     [deps.ArrayLayouts.extensions]
@@ -130,10 +130,10 @@ uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b"
 version = "0.1.5"
 
 [[deps.BoundaryValueDiffEq]]
-deps = ["ADTypes", "Adapt", "ArrayInterface", "BandedMatrices", "ConcreteStructs", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "LinearSolve", "NonlinearSolve", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "Setfield", "SparseArrays", "SparseDiffTools", "Tricks", "TruncatedStacktraces", "UnPack"]
-git-tree-sha1 = "8a19e2457da8a7e5ae54ee9479885738d8fd926b"
+deps = ["ADTypes", "Adapt", "ArrayInterface", "BandedMatrices", "ConcreteStructs", "DiffEqBase", "FastAlmostBandedMatrices", "ForwardDiff", "LinearAlgebra", "LinearSolve", "NonlinearSolve", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "Setfield", "SparseArrays", "SparseDiffTools", "Tricks", "TruncatedStacktraces", "UnPack"]
+git-tree-sha1 = "959bf1e2ada0bcc21f92fe2593a32ab5e7a78993"
 uuid = "764a87c0-6b3e-53db-9096-fe964310641d"
-version = "5.4.0"
+version = "5.5.0"
 
     [deps.BoundaryValueDiffEq.extensions]
     BoundaryValueDiffEqODEInterfaceExt = "ODEInterface"
@@ -363,9 +363,9 @@ uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
 
 [[deps.DelayDiffEq]]
 deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SimpleUnPack"]
-git-tree-sha1 = "41d2ba41a6b6a3111c26c5015de4873b3958cf76"
+git-tree-sha1 = "e40378efd2af7658d0a0579aa9e15b17137368f4"
 uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb"
-version = "5.43.2"
+version = "5.44.0"
 
 [[deps.DelimitedFiles]]
 deps = ["Mmap"]
@@ -375,9 +375,9 @@ version = "1.9.1"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"]
-git-tree-sha1 = "4aff905c723e3f883064f00a4ba553b29372ce57"
+git-tree-sha1 = "09ce9525b590bcdd9a807142dc493692aee85ef9"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.142.0"
+version = "6.143.0"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseChainRulesCoreExt = "ChainRulesCore"
@@ -405,16 +405,16 @@ version = "6.142.0"
 
 [[deps.DiffEqCallbacks]]
 deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "Functors", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"]
-git-tree-sha1 = "4e4de57a0ac47b2f20aae62f132355b058e9f0cd"
+git-tree-sha1 = "d0b94b3694d55e7eedeee918e7daee9e3b873399"
 uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def"
-version = "2.34.0"
+version = "2.35.0"
 weakdeps = ["OrdinaryDiffEq", "Sundials"]
 
 [[deps.DiffEqNoiseProcess]]
 deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"]
-git-tree-sha1 = "57ed4597a309c5b2a10cab5f9813adcb78f92117"
+git-tree-sha1 = "319377c927a4aa1f491228b2ac23f3554a3497c6"
 uuid = "77a26b50-5914-5dd7-bc55-306e6241c503"
-version = "5.19.0"
+version = "5.20.0"
 
     [deps.DiffEqNoiseProcess.extensions]
     DiffEqNoiseProcessReverseDiffExt = "ReverseDiff"
@@ -552,6 +552,12 @@ git-tree-sha1 = "466d45dc38e15794ec7d5d63ec03d776a9aff36e"
 uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5"
 version = "4.4.4+1"
 
+[[deps.FastAlmostBandedMatrices]]
+deps = ["ArrayInterface", "ArrayLayouts", "BandedMatrices", "ConcreteStructs", "LazyArrays", "LinearAlgebra", "MatrixFactorizations", "PrecompileTools", "Reexport"]
+git-tree-sha1 = "178316d87f883f0702e79d9c83a8049484c9f619"
+uuid = "9d29842c-ecb8-4973-b1e9-a27b1157504e"
+version = "0.1.0"
+
 [[deps.FastBroadcast]]
 deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"]
 git-tree-sha1 = "a6e756a880fc419c8b41592010aebe6a5ce09136"
@@ -580,9 +586,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
 
 [[deps.FillArrays]]
 deps = ["LinearAlgebra", "Random"]
-git-tree-sha1 = "25a10f2b86118664293062705fd9c7e2eda881a2"
+git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1"
 uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
-version = "1.9.2"
+version = "1.9.3"
 weakdeps = ["PDMats", "SparseArrays", "Statistics"]
 
     [deps.FillArrays.extensions]
@@ -865,15 +871,15 @@ version = "3.0.1+0"
 
 [[deps.JuliaFormatter]]
 deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"]
-git-tree-sha1 = "b588d0d7e15d100f5d417c036e42a64d20eef496"
+git-tree-sha1 = "8f5295e46f594ad2d8652f1098488a77460080cd"
 uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899"
-version = "1.0.44"
+version = "1.0.45"
 
 [[deps.JumpProcesses]]
 deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "UnPack"]
-git-tree-sha1 = "e047c47fca2ac1ac687e006a257f96632fb95a7b"
+git-tree-sha1 = "5845d14005b61d25de082c8b3badf77486747944"
 uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5"
-version = "9.9.0"
+version = "9.10.0"
 weakdeps = ["FastBroadcast"]
 
     [deps.JumpProcesses.extensions]
@@ -922,9 +928,9 @@ version = "1.3.1"
 
 [[deps.LabelledArrays]]
 deps = ["ArrayInterface", "ChainRulesCore", "ForwardDiff", "LinearAlgebra", "MacroTools", "PreallocationTools", "RecursiveArrayTools", "StaticArrays"]
-git-tree-sha1 = "cd04158424635efd05ff38d5f55843397b7416a9"
+git-tree-sha1 = "f12f2225c999886b69273f84713d1b9cb66faace"
 uuid = "2ee39098-c373-598a-b85f-a56591580800"
-version = "1.14.0"
+version = "1.15.0"
 
 [[deps.LambertW]]
 git-tree-sha1 = "c5ffc834de5d61d00d2b0e18c96267cffc21f648"
@@ -963,6 +969,16 @@ git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f"
 uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0"
 version = "0.15.1"
 
+[[deps.LazyArrays]]
+deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "MatrixFactorizations", "SparseArrays"]
+git-tree-sha1 = "08d56555410b0683cd7b48bff37aa59cbb0ea908"
+uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02"
+version = "1.8.2"
+weakdeps = ["StaticArrays"]
+
+    [deps.LazyArrays.extensions]
+    LazyArraysStaticArraysExt = "StaticArrays"
+
 [[deps.LazyArtifacts]]
 deps = ["Artifacts", "Pkg"]
 uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3"
@@ -1055,9 +1071,9 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 
 [[deps.LinearSolve]]
 deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"]
-git-tree-sha1 = "1961a307fae7aef8e2b331902c6072f0e90e5abb"
+git-tree-sha1 = "03cd36673f050ec49f9bdfce31e0e7e22d877e64"
 uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
-version = "2.20.2"
+version = "2.21.0"
 
     [deps.LinearSolve.extensions]
     LinearSolveBandedMatricesExt = "BandedMatrices"
@@ -1150,6 +1166,12 @@ version = "0.1.8"
 deps = ["Base64"]
 uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
 
+[[deps.MatrixFactorizations]]
+deps = ["ArrayLayouts", "LinearAlgebra", "Printf", "Random"]
+git-tree-sha1 = "78f6e33434939b0ac9ba1df81e6d005ee85a7396"
+uuid = "a3b82374-2e81-5b9e-98ce-41277c0e4c87"
+version = "2.1.0"
+
 [[deps.MbedTLS]]
 deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "NetworkOptions", "Random", "Sockets"]
 git-tree-sha1 = "c067a280ddc25f196b5e7df3877c6b226d390aaf"
@@ -1420,9 +1442,9 @@ version = "0.2.4"
 
 [[deps.PreallocationTools]]
 deps = ["Adapt", "ArrayInterface", "ForwardDiff", "Requires"]
-git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163"
+git-tree-sha1 = "01ac95fca7daabe77a9cb705862bd87016af9ddb"
 uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46"
-version = "0.4.12"
+version = "0.4.13"
 
     [deps.PreallocationTools.extensions]
     PreallocationToolsReverseDiffExt = "ReverseDiff"
@@ -1616,9 +1638,9 @@ version = "0.6.42"
 
 [[deps.SciMLBase]]
 deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"]
-git-tree-sha1 = "d432b4c4cc922fb7b21b555c138aa87f9fb7beb8"
+git-tree-sha1 = "32ea825941f7b58a6f48268f4b76971ae8eb9eec"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.9.1"
+version = "2.10.0"
 
     [deps.SciMLBase.extensions]
     SciMLBaseChainRulesCoreExt = "ChainRulesCore"
@@ -1767,9 +1789,9 @@ version = "0.8.8"
 
 [[deps.StaticArrayInterface]]
 deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"]
-git-tree-sha1 = "03fec6800a986d191f64f5c0996b59ed526eda25"
+git-tree-sha1 = "5d66818a39bb04bf328e92bc933ec5b4ee88e436"
 uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718"
-version = "1.4.1"
+version = "1.5.0"
 weakdeps = ["OffsetArrays", "StaticArrays"]
 
     [deps.StaticArrayInterface.extensions]
@@ -1826,10 +1848,10 @@ uuid = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f"
 version = "1.16.1"
 
 [[deps.StochasticDiffEq]]
-deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
-git-tree-sha1 = "7a71f1e67cbcfcd5387707e6621431d1afff62a9"
+deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
+git-tree-sha1 = "753219de57ac7aab0feb88871d3c51e0eb5e3b03"
 uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0"
-version = "6.63.2"
+version = "6.64.0"
 
 [[deps.StrideArraysCore]]
 deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"]
@@ -1854,9 +1876,9 @@ version = "5.10.1+6"
 
 [[deps.Sundials]]
 deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "PrecompileTools", "Reexport", "SciMLBase", "SparseArrays", "Sundials_jll"]
-git-tree-sha1 = "ab6c39958d245299e134b054414d73eb1e388ae6"
+git-tree-sha1 = "f8992f3fe2388e0de5f67376ce6aaf4c90b4ee4c"
 uuid = "c3572dad-4567-51f8-b174-8c6c989267f4"
-version = "4.22.0"
+version = "4.22.1"
 
 [[deps.Sundials_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"]