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Julia Dependency Update #367

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Oct 21, 2024
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Julia Dependency Update #367

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75 changes: 48 additions & 27 deletions Manifest.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -154,9 +154,9 @@ version = "1.1.1"

[[deps.Bzip2_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "9e2a6b69137e6969bab0152632dcb3bc108c8bdd"
git-tree-sha1 = "8873e196c2eb87962a2048b3b8e08946535864a1"
uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0"
version = "1.0.8+1"
version = "1.0.8+2"

[[deps.CPUSummary]]
deps = ["CpuId", "IfElse", "PrecompileTools", "Static"]
Expand All @@ -172,9 +172,9 @@ version = "3.4.3"

[[deps.CSV]]
deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "PrecompileTools", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"]
git-tree-sha1 = "6c834533dc1fabd820c1db03c839bf97e45a3fab"
git-tree-sha1 = "deddd8725e5e1cc49ee205a1964256043720a6c3"
uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
version = "0.10.14"
version = "0.10.15"

[[deps.Cairo_jll]]
deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"]
Expand Down Expand Up @@ -387,9 +387,9 @@ version = "1.9.1"

[[deps.DiffEqBase]]
deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "TruncatedStacktraces"]
git-tree-sha1 = "9c36ac68cf6c59a1c2569aadd7a62c47ed5c8eb5"
git-tree-sha1 = "f8eefbb7e910f59087c4bb09ce670f235758ee4a"
uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
version = "6.158.1"
version = "6.158.3"

[deps.DiffEqBase.extensions]
DiffEqBaseCUDAExt = "CUDA"
Expand Down Expand Up @@ -648,6 +648,27 @@ git-tree-sha1 = "cbf5edddb61a43669710cbc2241bc08b36d9e660"
uuid = "29a986be-02c6-4525-aec4-84b980013641"
version = "2.0.4"

[[deps.FastPower]]
git-tree-sha1 = "46aee43f62bc2bc06a74e2d668ffeea0a2689c93"
uuid = "a4df4552-cc26-4903-aec0-212e50a0e84b"
version = "1.1.0"

[deps.FastPower.extensions]
FastPowerEnzymeExt = "Enzyme"
FastPowerForwardDiffExt = "ForwardDiff"
FastPowerMeasurementsExt = "Measurements"
FastPowerMonteCarloMeasurementsExt = "MonteCarloMeasurements"
FastPowerReverseDiffExt = "ReverseDiff"
FastPowerTrackerExt = "Tracker"

[deps.FastPower.weakdeps]
Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9"
ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7"
MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca"
ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"

[[deps.FilePathsBase]]
deps = ["Compat", "Dates"]
git-tree-sha1 = "7878ff7172a8e6beedd1dea14bd27c3c6340d361"
Expand Down Expand Up @@ -964,9 +985,9 @@ version = "1.0.62"

[[deps.JumpProcesses]]
deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "SymbolicIndexingInterface", "UnPack"]
git-tree-sha1 = "6e0fb267f2c869df59b6bf9f8cb0f2794f2d85e9"
git-tree-sha1 = "c3a2cb6f968404ed3b1d5382bbdd7b7d83966598"
uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5"
version = "9.13.7"
version = "9.14.0"
weakdeps = ["FastBroadcast"]

[[deps.KLU]]
Expand Down Expand Up @@ -1134,9 +1155,9 @@ version = "2.40.1+0"

[[deps.LineSearch]]
deps = ["ADTypes", "CommonSolve", "ConcreteStructs", "FastClosures", "LinearAlgebra", "MaybeInplace", "SciMLBase", "SciMLJacobianOperators", "StaticArraysCore"]
git-tree-sha1 = "dc82b3c3640a4362f09e4d7594b4387a820857e4"
git-tree-sha1 = "97d502765cc5cf3a722120f50da03c2474efce04"
uuid = "87fe0de2-c867-4266-b59a-2f0a94fc965b"
version = "0.1.3"
version = "0.1.4"
weakdeps = ["LineSearches"]

[deps.LineSearch.extensions]
Expand All @@ -1155,9 +1176,9 @@ version = "1.11.0"

[[deps.LinearSolve]]
deps = ["ArrayInterface", "ChainRulesCore", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "LazyArrays", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"]
git-tree-sha1 = "8941ad4bdd83768359801982e143008349b1a827"
git-tree-sha1 = "ddb60aabc5efb0670c7ddde5fedf7ab44520a3e6"
uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
version = "2.35.0"
version = "2.36.1"

[deps.LinearSolve.extensions]
LinearSolveBandedMatricesExt = "BandedMatrices"
Expand Down Expand Up @@ -1457,10 +1478,10 @@ uuid = "6ad6398a-0878-4a85-9266-38940aa047c8"
version = "1.1.2"

[[deps.OrdinaryDiffEqCore]]
deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "FastBroadcast", "FastClosures", "FillArrays", "FunctionWrappersWrappers", "InteractiveUtils", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleUnPack", "Static", "StaticArrayInterface", "StaticArraysCore", "TruncatedStacktraces"]
git-tree-sha1 = "f4b7b11e2e4c0f4a7fe15d2edcec1e1ce2917d67"
deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "FastBroadcast", "FastClosures", "FastPower", "FillArrays", "FunctionWrappersWrappers", "InteractiveUtils", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleUnPack", "Static", "StaticArrayInterface", "StaticArraysCore", "TruncatedStacktraces"]
git-tree-sha1 = "1175717a62ab21736a8f5d0d2531d2a6ad3b9e74"
uuid = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
version = "1.7.1"
version = "1.9.0"
weakdeps = ["EnzymeCore"]

[deps.OrdinaryDiffEqCore.extensions]
Expand Down Expand Up @@ -1491,10 +1512,10 @@ uuid = "e0540318-69ee-4070-8777-9e2de6de23de"
version = "1.1.0"

[[deps.OrdinaryDiffEqExtrapolation]]
deps = ["DiffEqBase", "FastBroadcast", "LinearSolve", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "Polyester", "RecursiveArrayTools", "Reexport"]
git-tree-sha1 = "fea595528a160ed5cade9eee217a9691b1d97714"
deps = ["DiffEqBase", "FastBroadcast", "FastPower", "LinearSolve", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "Polyester", "RecursiveArrayTools", "Reexport"]
git-tree-sha1 = "0260b1657069608f2a2f26f58f65019d8a9070ab"
uuid = "becaefa8-8ca2-5cf9-886d-c06f3d2bd2c4"
version = "1.1.0"
version = "1.2.0"

[[deps.OrdinaryDiffEqFIRK]]
deps = ["DiffEqBase", "FastBroadcast", "LinearAlgebra", "LinearSolve", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "RecursiveArrayTools", "Reexport", "SciMLOperators"]
Expand Down Expand Up @@ -1960,10 +1981,10 @@ uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa"
version = "0.6.43"

[[deps.SciMLBase]]
deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
git-tree-sha1 = "50ed64cd5ad79b0bef71fdb6a11d10c3448bfef0"
deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"]
git-tree-sha1 = "26fea1911818cd480400f1a2b7f6b32c3cc3836a"
uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
version = "2.56.1"
version = "2.56.4"

[deps.SciMLBase.extensions]
SciMLBaseChainRulesCoreExt = "ChainRulesCore"
Expand Down Expand Up @@ -1992,9 +2013,9 @@ version = "0.1.0"

[[deps.SciMLOperators]]
deps = ["Accessors", "ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools"]
git-tree-sha1 = "e39c5f217f9aca640c8e27ab21acf557a3967db5"
git-tree-sha1 = "ef388ca9e4921ec5614ce714f8aa59a5cd33d867"
uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961"
version = "0.3.10"
version = "0.3.11"
weakdeps = ["SparseArrays", "StaticArraysCore"]

[deps.SciMLOperators.extensions]
Expand Down Expand Up @@ -2091,9 +2112,9 @@ version = "1.11.0"

[[deps.SparseConnectivityTracer]]
deps = ["ADTypes", "DocStringExtensions", "FillArrays", "LinearAlgebra", "Random", "SparseArrays"]
git-tree-sha1 = "35d346f6aa78814859f1f69cd4f41c24108afa00"
git-tree-sha1 = "6914df6005bab9940e2a96879a97a43e1fb1ce78"
uuid = "9f842d2f-2579-4b1d-911e-f412cf18a3f5"
version = "0.6.7"
version = "0.6.8"

[deps.SparseConnectivityTracer.extensions]
SparseConnectivityTracerDataInterpolationsExt = "DataInterpolations"
Expand Down Expand Up @@ -2286,9 +2307,9 @@ version = "3.7.2"

[[deps.Symbolics]]
deps = ["ADTypes", "ArrayInterface", "Bijections", "CommonWorldInvalidations", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "IfElse", "LaTeXStrings", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "Primes", "RecipesBase", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArraysCore", "SymbolicIndexingInterface", "SymbolicLimits", "SymbolicUtils", "TermInterface"]
git-tree-sha1 = "aa3218c29b81384531631b2e5354fdf034a13ec2"
git-tree-sha1 = "a083b653dc5ebf810e7cf5688679c26d0b62ffbb"
uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7"
version = "6.14.1"
version = "6.15.3"

[deps.Symbolics.extensions]
SymbolicsForwardDiffExt = "ForwardDiff"
Expand Down