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Fix: Submissions filters with order_by for the same attribute #46

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merged 6 commits into from
Sep 21, 2023

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Context

This PR fixes the following not-working filters and adds a test for all the implemented filters for the submission endpoint.

Fixed filters:

  • Search submissions with names and acronyms
  • Search with sort
  • Search with format
  • Filters submissions by submission attribute mixed with ontology attributes

Changes

@syphax-bouazzouni syphax-bouazzouni force-pushed the fix/submission-filters-endpoints branch from f5b51ed to 25d7f84 Compare September 21, 2023 18:14
@syphax-bouazzouni syphax-bouazzouni merged commit bd6494c into development Sep 21, 2023
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syphax-bouazzouni added a commit that referenced this pull request Dec 5, 2023
* add request_lang middleware

* pin redis gem version to 4.8.1

* update Gemfile.lock

* [ontoportal-bot] Gemfile.lock update

* [ontoportal-bot] Gemfile.lock update

* [ontoportal-bot] Gemfile.lock update

* update Gemfile to use ontologies_linked_data new metadata branch

* update TestOntologySubmissionsController to be adapted to the new model

* [ontoportal-bot] Gemfile.lock update

* [ontoportal-bot] Gemfile.lock update

* [ontoportal-bot] Gemfile.lock update

* in submission_metadata rename display with category

* add to submission_metadata description and example fields

* add the option to do pagination for the submission endpoint

* extract retrieve_latest_submissions method to submission helper

* implement apply_filters to submissions endpoint using SPARQL FILTERs

* add test for submissions endpoint pagination

* [ontoportal-bot] Gemfile.lock update

* fix private only submission filter

* add hasFormalityLevel filter for submissions endpoint

* add  for ontology: reviews, notes, projects on the submissions endpoints

* bring submission metrics for submissions  endpoints

* bring all contact attributes if asked in the submissions endpoints

* refactor submissions endpoint filters by extracting some methods

* add ontology acronym or name filters for submissions endpoints

* add submissions endpoint order_by option

* [ontoportal-bot] Gemfile.lock update

* fix including ontology and contacts in the submissions endpoints

* fix list admin filter_access control (e.g for submissions  endpoints)

* [ontoportal-bot] Gemfile.lock update

* check access of ontologies in /ontologies/:acronym/submissions endpoint

* include ontology viewOf attribute in the submission endpoints

* make apply_filters helper generic for any of model attributes

* add Agents controller

* add pagination to agents index endpoint if asked

* make agents routes work for /Agent and /agent

* handle agent indentifiers and affiliations attributes  save and update

* make agent controller work for affiliations attribute

* add agent controller tests

* don't update affiliations if only 'id' sent in params

* bring identifier attributes when we update an agent

* update agent test to work with the new Agent validators

* bring the agent attributes on display all of the submissions endpoints

* handle exception for  class attribute but aren't in populate_from_params

* update Gemfile to use development branch of OLD

* refactor user controller to extract reset password helpers

* remove the send notification on user creation, now handled by user.save

* add access token authentication

* fix test after enforcing the uniqueness of user emails

* fix search test

* add oauth_authentication test

* bring the correct attributes when the oauth_authenticate is used

* Feature: Add support of multilingual search (#40)

* update get_term_search_query to support multilanguages search

* rename var

* fix search lang suffix to use underscore not @

* add multilangual search test

---------

Co-authored-by: Syphax Bouazzouni <[email protected]>

* add get submission all including all properties test

* extract and use submission_include_params where we use submission.bring

* use retrieve_submissions helper in the :acronym/submissions endpoint

* update Goo version and add submissions filters test

* Fix: display contact for get submissions  (#45)

* add get submission all including all properties test

* extract and use submission_include_params where we use submission.bring

* use retrieve_submissions helper in the :acronym/submissions endpoint

* Fix: Submissions filters with order_by  for the same attribute  (#46)

* add get submission all including all properties test

* extract and use submission_include_params where we use submission.bring

* use retrieve_submissions helper in the :acronym/submissions endpoint

* update Goo version and add submissions filters test

* make the ontology submissions endpoint include views

* include all metrics attribues in the submissions endpoints (#53)

* add ontology submissions filter by status (#56)

* add agent usage attribute tests (#55)

* Fix: optimize fetching all agents usages query by batch loading them (#57)

* add agent usage attribute tests

* optimize fetching all agents usages query by batch loading them

* Feature: Add ontologies_api docker image build CI  (#58)

* add docker build CI

* Feature: add ontoportal bash script (#59)

* add ontoportal bash script to run test and development servers

* update README.md

* update docker CI to work in production releases

* Feature: add ontoportal bash script (#59)

* add ontoportal bash script to run test and development servers

* update README.md

* update docker CI to work in production releases

* fix date list properties population helper

* Feature: update ontoportal bash script to handle local gems binding   (#61)

* add ontoportal bash script to run test and development servers

* update README.md

* update docker CI to work in production releases

* update ontoportal script to handle local gems bindq

* update ontoportal script to handle binding to local gem for development

* fixing the test runner after the new changes in the ontoportal script

* add description filter to the submissions endpoint (#62)

---------

Co-authored-by: OntoPortal Bot <[email protected]>
Co-authored-by: HADDAD Zineddine <[email protected]>
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