v0.2.1 - automatically convert mapq1 and mapq2 to int in select

open2c · Dec 21, 2018 · 07eb10c · 07eb10c
1 parent a7c51a0
commit 07eb10c
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Showing 3 changed files with 6 additions and 2 deletions.
diff --git a/CHANGES.md b/CHANGES.md
@@ -1,3 +1,7 @@
+### 0.2.1 (2018-12-21) ###
+
+* automatically convert mapq1 and mapq2 to int in `select`
+
 ### 0.2.0 (2018-09-03) ###
 
 * add the `flip` tool

diff --git a/pairtools/__init__.py b/pairtools/__init__.py
@@ -11,7 +11,7 @@
 
 """
 
-__version__ = '0.2.0'
+__version__ = '0.2.1'
 
 
 import click

diff --git a/pairtools/pairtools_select.py b/pairtools/pairtools_select.py
@@ -163,7 +163,7 @@ def regex_match(x, regex):
                           'and (chrom2 in new_chroms)').format(condition)
 
     for i,col in enumerate(column_names):
-        if col in ['pos1', 'pos2']:
+        if col in ['pos1', 'pos2', 'mapq1', 'mapq2']:
             condition = condition.replace(col, 'int(COLS[{}])'.format(i))
         else:
             condition = condition.replace(col, 'COLS[{}]'.format(i))