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Change meaning of ref and alt fields #142

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iskandr opened this issue Apr 18, 2016 · 0 comments
Open

Change meaning of ref and alt fields #142

iskandr opened this issue Apr 18, 2016 · 0 comments

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@iskandr
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iskandr commented Apr 18, 2016

Currently variant.ref and variant.alt don't contain any shared prefix or suffix. This confuses user since they expect whatever values passed in for these fields to be unchanged.

Breaking change: rename the current ref and alt fields to trimmed_ref and trimmed_alt and get rid of original_ref and original_alt.

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