Skip to content
@openworm

OpenWorm

An open-source project dedicated to creating a virtual C. elegans nematode in a computer.
README.md

OpenWorm

An open-source project dedicated to creating a virtual C. elegans nematode in a computer.

An overview of the core repositories in the project, along with the current status of automated testing, can be found here.

Pinned Loading

  1. OpenWorm OpenWorm Public

    Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    Python 2.8k 218

  2. openworm.github.io openworm.github.io Public

    OpenWorm main website

    HTML 28 36

  3. org.geppetto org.geppetto Public

    Geppetto is an open-source platform to build web-based applications to visualize and simulate neuroscience data and models.

    Python 213 50

  4. c302 c302 Public

    The c302 framework for generating multiscale network models of C. elegans

    Python 120 24

  5. ChannelWorm2 ChannelWorm2 Public

    Tools and curated datasets to build quantitative models of C. elegans ion channels

    Jupyter Notebook 11 2

Repositories

Showing 10 of 105 repositories
  • CE_locomotion Public Forked from edizquierdo/CE_locomotion

    Neuromechanical model of locomotion in C. elegans, originally developed by Eduardo Izquerdo, Erick Olivares and Randall Beer

    openworm/CE_locomotion’s past year of commit activity
    C++ 1 5 7 4 Updated May 2, 2025
  • NeuroPAL Public

    Scripts to analyse and convert NeuroPAL datasets

    openworm/NeuroPAL’s past year of commit activity
    Jupyter Notebook 4 0 0 0 Updated Apr 29, 2025
  • NicolettiEtAl2019_NeuronModels Public Forked from ModelDBRepository/267187

    Biophysical models of AWCon and RMD C. elegans neurons (M. Nicoletti at al. 2019)

    openworm/NicolettiEtAl2019_NeuronModels’s past year of commit activity
    Jupyter Notebook 1 2 2 0 Updated Apr 28, 2025
  • tracker-commons Public

    Compilation of information and code bases related to open-source trackers for C. elegans

    openworm/tracker-commons’s past year of commit activity
    Scala 12 13 28 (2 issues need help) 4 Updated Apr 23, 2025
  • ConnectomeToolbox Public

    Information on published connectomics data related to C. elegans

    openworm/ConnectomeToolbox’s past year of commit activity
    Python 2 4 3 1 Updated Apr 23, 2025
  • openworm.ai Public

    Scripts related to use of LLMs and other AI technology in OpenWorm

    openworm/openworm.ai’s past year of commit activity
    HTML 1 MIT 0 2 0 Updated Apr 23, 2025
  • geppetto-client Public

    The web client of a Geppetto application

    openworm/geppetto-client’s past year of commit activity
    JavaScript 5 2 70 27 Updated Apr 18, 2025
  • c302 Public

    The c302 framework for generating multiscale network models of C. elegans

    openworm/c302’s past year of commit activity
    Python 120 24 8 (1 issue needs help) 1 Updated Apr 14, 2025
  • OpenWorm Public

    Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    openworm/OpenWorm’s past year of commit activity
    Python 2,814 MIT 218 41 4 Updated Apr 11, 2025
  • org.geppetto.frontend Public

    Geppetto Java frontend bundle

    openworm/org.geppetto.frontend’s past year of commit activity
    Java 29 25 2 4 Updated Apr 3, 2025
View all repositories

Top languages

Loading…