📊 mean paternal age at birth (#3694)

* 📊 mean paternal age at birth * wip * typo in short_name * add multiple reading from RData files * wip * meadow * wip * remove spurious rows * add reading function * fix condition * working grapher * wip
owid · Dec 11, 2024 · 7d89c47 · 7d89c47
1 parent 897ea01
commit 7d89c47
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Showing 12 changed files with 2,157 additions and 2 deletions.
diff --git a/dag/demography.yml b/dag/demography.yml
@@ -263,7 +263,15 @@ steps:
     - data://garden/hmd/2024-12-01/hmd
   data://grapher/hmd/2024-12-03/hmd_country:
     - data://garden/hmd/2024-12-03/hmd_country
-
+
+  # Patternal ages (Kai & Klüssner)
+  data://meadow/demography/2024-12-05/paternal_ages:
+    - snapshot://demography/2024-12-04/paternal_ages.rdata
+  data://garden/demography/2024-12-05/paternal_ages:
+    - data://meadow/demography/2024-12-05/paternal_ages
+  data://grapher/demography/2024-12-05/paternal_ages:
+    - data://garden/demography/2024-12-05/paternal_ages
+
   ########################################################################
   # OTHERS
   ########################################################################

diff --git a/etl/snapshot.py b/etl/snapshot.py
@@ -4,7 +4,7 @@
 import tempfile
 from dataclasses import dataclass
 from pathlib import Path
-from typing import Any, Iterator, Optional, Union, cast
+from typing import Any, Dict, Iterator, Optional, Union, cast
 
 import owid.catalog.processing as pr
 import pandas as pd
@@ -229,6 +229,29 @@ def read_rda(self, *args, **kwargs) -> Table:
         """Read R data .rda file into a Table and populate it with metadata."""
         return pr.read_rda(self.path, *args, metadata=self.to_table_metadata(), origin=self.metadata.origin, **kwargs)
 
+    def read_rda_multiple(self, *args, **kwargs) -> Dict[str, Table]:
+        """Read R data .rda file into multiple Tables and populate it with metadata.
+
+        RData objects can contain multiple dataframes.
+
+        Read specific dataframes from an RData file:
+
+        ```python
+        tables = snap.read_rda_multiple(["tname1", "tname2"])
+        ```
+
+        If you don't provide any table names, all tables will be read:
+
+        ```python
+        tables = snap.read_rda_multiple()
+        ```
+
+        where tables is a key-value dictionary, and keys are the names of the tables (same as table short_names too).
+        """
+        return pr.read_rda_multiple(
+            self.path, *args, metadata=self.to_table_metadata(), origin=self.metadata.origin, **kwargs
+        )
+
     def read_fwf(self, *args, **kwargs) -> Table:
         """Read a table of fixed-width formatted lines with metadata."""
         return pr.read_fwf(self.path, *args, metadata=self.to_table_metadata(), origin=self.metadata.origin, **kwargs)

diff --git a/etl/steps/data/garden/demography/2024-12-05/paternal_ages.countries.json b/etl/steps/data/garden/demography/2024-12-05/paternal_ages.countries.json
@@ -0,0 +1,133 @@
+{
+  "ALB": "Albania",
+  "AND": "Andorra",
+  "ANT": "Netherlands Antilles",
+  "ARG": "Argentina",
+  "ARM": "Armenia",
+  "ASM": "American Samoa",
+  "AUS": "Australia",
+  "AUT": "Austria",
+  "AZE": "Azerbaijan",
+  "BEL": "Belgium",
+  "BGR": "Bulgaria",
+  "BHR": "Bahrain",
+  "BHS": "Bahamas",
+  "BIH": "Bosnia and Herzegovina",
+  "BLR": "Belarus",
+  "BLZ": "Belize",
+  "BOL": "Bolivia",
+  "BRB": "Barbados",
+  "BRN": "Brunei",
+  "CAF": "Central African Republic",
+  "CAN": "Canada",
+  "CHE": "Switzerland",
+  "CHL": "Chile",
+  "COG": "Congo",
+  "COL": "Colombia",
+  "CRI": "Costa Rica",
+  "CUB": "Cuba",
+  "CYP": "Cyprus",
+  "CZE": "Czechia",
+  "DEU": "Germany",
+  "DNK": "Denmark",
+  "DOM": "Dominican Republic",
+  "DZA": "Algeria",
+  "ECU": "Ecuador",
+  "EGY": "Egypt",
+  "ESP": "Spain",
+  "EST": "Estonia",
+  "FIN": "Finland",
+  "FJI": "Fiji",
+  "FRA": "France",
+  "FRO": "Faroe Islands",
+  "GEO": "Georgia",
+  "GIN": "Guinea",
+  "GLP": "Guadeloupe",
+  "GRC": "Greece",
+  "GRL": "Greenland",
+  "GTM": "Guatemala",
+  "GUF": "French Guiana",
+  "GUM": "Guam",
+  "GUY": "Guyana",
+  "HND": "Honduras",
+  "HRV": "Croatia",
+  "HUN": "Hungary",
+  "IRL": "Ireland",
+  "IRQ": "Iraq",
+  "ISL": "Iceland",
+  "ISR": "Israel",
+  "ITA": "Italy",
+  "JAM": "Jamaica",
+  "JOR": "Jordan",
+  "JPN": "Japan",
+  "KAZ": "Kazakhstan",
+  "KGZ": "Kyrgyzstan",
+  "KOR": "South Korea",
+  "KWT": "Kuwait",
+  "LBY": "Libya",
+  "LTU": "Lithuania",
+  "LUX": "Luxembourg",
+  "LVA": "Latvia",
+  "MAC": "Macao",
+  "MAR": "Morocco",
+  "MCO": "Monaco",
+  "MDA": "Moldova",
+  "MDV": "Maldives",
+  "MEX": "Mexico",
+  "MKD": "North Macedonia",
+  "MLT": "Malta",
+  "MNG": "Mongolia",
+  "MTQ": "Martinique",
+  "MUS": "Mauritius",
+  "MYS": "Malaysia",
+  "MYT": "Mayotte",
+  "NAM": "Namibia",
+  "NCL": "New Caledonia",
+  "NIC": "Nicaragua",
+  "NLD": "Netherlands",
+  "NOR": "Norway",
+  "NRU": "Nauru",
+  "NZL": "New Zealand",
+  "OMN": "Oman",
+  "PAK": "Pakistan",
+  "PAN": "Panama",
+  "PER": "Peru",
+  "PHL": "Philippines",
+  "PLW": "Palau",
+  "PNG": "Papua New Guinea",
+  "POL": "Poland",
+  "PRI": "Puerto Rico",
+  "PRT": "Portugal",
+  "PYF": "French Polynesia",
+  "QAT": "Qatar",
+  "REU": "Reunion",
+  "ROM": "Romania",
+  "RUS": "Russia",
+  "SGP": "Singapore",
+  "SHN": "Saint Helena",
+  "SLV": "El Salvador",
+  "SMR": "San Marino",
+  "SPM": "Saint Pierre and Miquelon",
+  "SRB": "Serbia",
+  "SVK": "Slovakia",
+  "SVN": "Slovenia",
+  "SWE": "Sweden",
+  "SYC": "Seychelles",
+  "TJK": "Tajikistan",
+  "TTO": "Trinidad and Tobago",
+  "TUN": "Tunisia",
+  "TUR": "Turkey",
+  "TWN": "Taiwan",
+  "UKR": "Ukraine",
+  "URY": "Uruguay",
+  "USA": "United States",
+  "UZB": "Uzbekistan",
+  "VEN": "Venezuela",
+  "VIR": "United States Virgin Islands",
+  "WSM": "Samoa",
+  "ZAF": "South Africa",
+  "GBREW": "England and Wales",
+  "GBRNI": "Northern Ireland",
+  "GBRSC": "Scotland",
+  "MON": "Yugoslavia"
+}