Trying to add coverage report (#60)

* Update README.md

* Update README.md

* trying to have a CI with coverage

* Update .github/workflows/pr_validation.yml

* adding badges folder

* Update pr_validation.yml

* Update pr_validation.yml

* Update pr_validation.yml

* Update .github/workflows/pr_validation.yml

* Update pr_validation.yml

* update coverage badge

* Update README.md

---------

Co-authored-by: jeandut <[email protected]>

.github/workflows/pr_validation.yml

@@ -47,10 +47,10 @@ jobs:
         python: ["3.9"]
         # python: ["3.9", "3.10", "3.11"]  # TODO: expand to other pythons
     steps:
-      - uses: actions/checkout@v3
-      - uses: actions/setup-python@v4
+      - uses: actions/checkout@v4
         with:
-          python-version: ${{ matrix.python }}
+          repository: ${{ github.event.pull_request.head.repo.full_name }}
+          ref: ${{ github.event.pull_request.head.ref }}
       - name: Install dependencies
         run: |
           python -m pip install --upgrade pip
@@ -67,3 +67,29 @@ jobs:
           name: test-coverage-report
           path: htmlcov/
           retention-days: 20
+      - name: Generate coverage status badge
+        if: github.event_name == 'pull_request'
+        run: |
+          set -x
+          total_cov=`grep -Eo '<span class="pc_cov">[0-9]+%</span>' htmlcov/index.html | grep -oe '\([0-9.]*\)'`
+          echo $total_cov
+          if [ "$total_cov" -le "50" ] ; then
+          COLOR=red
+          elif [ "$total_cov" -ge "90" ] ; then
+          COLOR=green
+          else
+          COLOR=orange
+          fi
+          echo $COLOR
+          echo "https://img.shields.io/badge/coverage-${total_cov}%25-${COLOR}"
+          curl "https://img.shields.io/badge/coverage-${total_cov}%25-${COLOR}" > badges/cov_badge.svg
+          echo "" >> badges/cov_badge.svg
+
+      - name: Commit coverage badge
+        if: github.event_name == 'pull_request'
+        uses: EndBug/add-and-commit@v9
+        with:
+          add: badges/cov_badge.svg
+          default_author: github_actor
+          pull: "--no-rebase"
+          message: "update coverage badge"

README.md

@@ -1,4 +1,5 @@
 # FedECA
+<img src="/badges/cov_badge.svg" >
 
 :arrow_right:[The API doc is available here](https://owkin.github.io/fedeca/):arrow_left:
 
@@ -59,4 +60,4 @@ archivePrefix = {arXiv},
       adsnote = {Provided by the SAO/NASA Astrophysics Data System}
 }
 
-```
+```