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Add CI coverage
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seananderson committed Mar 22, 2024
1 parent a298edb commit 30bd67c
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50 changes: 50 additions & 0 deletions .github/workflows/test-coverage.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: test-coverage

jobs:
test-coverage:
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::covr
needs: coverage

- name: Test coverage
run: |
covr::codecov(
quiet = FALSE,
clean = FALSE,
install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
)
shell: Rscript {0}

- name: Show testthat output
if: always()
run: |
## --------------------------------------------------------------------
find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload test results
if: failure()
uses: actions/upload-artifact@v4
with:
name: coverage-test-failures
path: ${{ runner.temp }}/package
2 changes: 2 additions & 0 deletions codecov.yml
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Expand Up @@ -6,7 +6,9 @@ coverage:
default:
target: auto
threshold: 1%
informational: true
patch:
default:
target: auto
threshold: 1%
informational: true
1 change: 1 addition & 0 deletions header.md
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[![](https://www.r-pkg.org/badges/version/sdmTMB)](https://cran.r-project.org/package=sdmTMB)
[![Documentation](https://img.shields.io/badge/documentation-sdmTMB-orange.svg?colorB=E91E63)](https://pbs-assess.github.io/sdmTMB/)
[![R-CMD-check](https://github.com/pbs-assess/sdmTMB/workflows/R-CMD-check/badge.svg)](https://github.com/pbs-assess/sdmTMB/actions)
[![Codecov test coverage](https://codecov.io/gh/pbs-assess/sdmTMB/branch/main/graph/badge.svg)](https://app.codecov.io/gh/pbs-assess/sdmTMB?branch=main)
[![downloads](http://cranlogs.r-pkg.org/badges/sdmTMB)](https://cranlogs.r-pkg.org/)
<!-- badges: end -->

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