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Prep CRAN comments [skip ci]
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seananderson committed Oct 17, 2023
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## Resubmission

This is a resubmission to fix 'Additional issues' on CRAN checks as requested.

We were unable to reproduce the exact valgrind/gcc-ASAN/clang-ASAN issue
identified in our re-submission (0.2.2), but have removed tangential
functionality that used 'rstan', which appears to have caused the errors on
the last CRAN checks.

We have tested the new package with valgrind on two systems and
with clang-ASAN/clang-UBSAN on the latest Fedora attempting to match the CRAN
setup and our checks pass.

Compared to the previously published version 0.2.1:

* We fixed a valgrind-detected issue with a vector length.
* We removed 2 Latin-1 strings in package data.
* We added 'future' and 'lme4' to Suggests to avoid 'Rd cross-references'
'Undeclared packages' NOTE.
* We removed selected vignettes and reduced the size of an included dataset.
The majority of the size is due to compiled code.

## R CMD check results

0 errors | 0 warnings | 2 notes
0 errors | 0 warnings | 0 notes

Suggests or Enhances not in mainstream repositories:
INLA
Availability using Additional_repositories specification:
INLA yes https://inla.r-inla-download.org/R/stable
...
Package unavailable to check Rd xrefs: 'INLA'

* This is correct and intended; INLA is not on CRAN.

checking installed package size ... NOTE
installed size is 5.5Mb
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 3.7Mb
libs 4.1Mb

* This is due to compiled code; we cannot reduce the size further.

## Test environments

* local macOS install, R 4.2.2
* Windows (on github-actions), R 4.2.2
* Ubuntu 20.04.4 (on github-actions), R-devel
* local macOS install, R 4.3.1
* Windows (on github-actions), R 4.3.1
* Ubuntu 22.04.3 (on github-actions), R-devel
* Windows (winbuilder), R devel
* Windows (winbuilder), R release

With sanitizer checks:

* Fedora release 38 (on docker), R-devel with clang ASAN, clang-UBSAN
* Ubuntu 20.04.4 (on github-actions), R-devel with valgrind
* Ubuntu 20.04.4 (on docker), R-devel with valgrind level 2 instrumentation

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