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estimating abundance in numbers #8

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EllenY opened this issue May 18, 2016 · 3 comments
Open

estimating abundance in numbers #8

EllenY opened this issue May 18, 2016 · 3 comments

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@EllenY
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EllenY commented May 18, 2016

Hi,
How would I modify the R code to estimate abundance in numbers and plot surface densities in numbers instead of weight?
Thank you,

@James-Thorson
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Analyzing count valued data is already an option, and involves specifying the using the ObsModel input to Data_Fn. You can find the list of available distributions, including count-valued distributions, using:

?SpatialDeltaGLMM::Data_Fn

after re-installing the package to use the most recent ('development') version.

@EllenY
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EllenY commented May 18, 2016

Thank you. Do I used this script to re-install the most recent package?
devtools::install_github("nwfsc-assess/geostatistical_delta-GLMM")

@James-Thorson
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Yes, that's the script, and you can also install past releases by
specifying the optional "ref" input

jim

On Wed, May 18, 2016 at 11:21 AM, EllenY [email protected] wrote:

Thank you. Do I used this script to re-install the most recent package?
devtools::install_github("nwfsc-assess/geostatistical_delta-GLMM")


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