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Starred repositories

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a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

Jupyter Notebook 1,549 440 Updated Mar 19, 2025

Segment Anything for Microscopy

Jupyter Notebook 491 60 Updated Mar 26, 2025

Cloud-based data annotation tools for biological images

JavaScript 79 15 Updated Feb 14, 2024

NLP2025 のチュートリアル「地理情報と言語処理 実践入門」の資料とソースコード

Jupyter Notebook 12 1 Updated Mar 25, 2025

Plain text format for Japanese law

TypeScript 77 5 Updated Feb 16, 2025
Python 20 2 Updated Sep 19, 2022

cell graph convolutional network

Python 67 22 Updated Oct 25, 2020

法律解析を行う際に便利な関数やデータ構造を定義するリポジトリです

Rust 1 1 Updated Dec 20, 2024

Open source tools for computational pathology - Nature BME

Python 1,264 404 Updated Dec 6, 2024

ORCA-SPOT: An Automatic Killer Whale Sound Detection Toolkit Using Deep Learning

Python 27 4 Updated Dec 6, 2022

Graph Neural Network Library for PyTorch

Python 22,099 3,787 Updated Mar 26, 2025

Python package built to ease deep learning on graph, on top of existing DL frameworks.

Python 13,796 3,043 Updated Feb 11, 2025
Python 5 Updated Feb 3, 2025

Papers about explainability of GNNs

713 68 Updated Mar 7, 2025

[NeurIPS'23 Oral] Visual Instruction Tuning (LLaVA) built towards GPT-4V level capabilities and beyond.

Python 21,994 2,411 Updated Aug 12, 2024

Ressources of histopathology datasets

351 58 Updated Mar 6, 2025

Awesome things about domain generalization, including papers, code, etc.

433 44 Updated Jan 15, 2025
Python 8,607 507 Updated Oct 9, 2024

DomainBed is a suite to test domain generalization algorithms

Python 1,480 308 Updated Dec 31, 2024

Official code for the CVPR23 paper: "Improved Test-Time Adaptation for Domain Generalization"

Python 33 2 Updated Jan 18, 2025

Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021

Python 143 28 Updated May 14, 2024

Axial Positional Embedding for Pytorch

Python 76 6 Updated Feb 25, 2025

Implementation of Vision Transformer, a simple way to achieve SOTA in vision classification with only a single transformer encoder, in Pytorch

Python 22,211 3,220 Updated Mar 5, 2025

Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.

Python 572 238 Updated Oct 27, 2023

Instance-based Vision Transformer for Subtyping of Papillary Renal Cell Carcinoma in Histopathological Image-MICCAI 2021

Python 17 4 Updated Dec 26, 2023
Python 70 14 Updated Jun 15, 2021

TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classification

Python 390 75 Updated May 3, 2024

cuCIM - RAPIDS GPU-accelerated image processing library

Jupyter Notebook 387 66 Updated Mar 26, 2025
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