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Enable bank post-processing using external scripts
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@pgdurand pgdurand released this 01 Mar 11:03
· 321 commits to master since this release
v4.6.0
29ed3f1
  • more generic command line scripts
  • enable to override KL_WORKING_DIR, KL_CONF_DIR and KL_JRE_ARGS variables before calling command-line scripts
  • enable to override conf/dbms.conf properties using JRE -D arguments
  • ensure to have default values setup for install.sh tool
  • refactor Log system; enables none, console or file; added KL_LOG_TYPE JRE command-line argument
  • enable the use of external scripts for bank post-processing tasks
  • enable FTP download resume
  • upgrade to new XStream, Bioinformatics-Core and Bioinformatics-UI libraries
  • annotator.sh tool uses the new native binary ZML data format (more suitable for large data files)
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