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Introducing new BeeDeeM unique command-line tools
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@pgdurand pgdurand released this 15 Mar 13:55
· 30 commits to master since this release
v5.0.0
583ab43
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New version of BeeDeeM introducing new command line tools.

  • Major change, not backward compatible are:

    • All old scripts (install.sh, query.sh, etc.) have been replaced by a unique command: bdm. That command accepts sub-commands, namely: install, query, etc. Use bdm -h to get general help, and bdm <command> -h to get help on a particular .
    • Drop native support of Windows system; users or invited to rely on Windows Subsystem Linux

  • Minor fixes:

    • Improvement of the cluster job submission system
    • Enable arguments passing to external scripts (pre- and post-processing)
    • Improvement of Uniprot description handling; only retain RecName or SubName from entries, better parsing of EC numbers.
    • Several bug fixes.
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